RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ADIPOR1Q96A54 375 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 RPUSD4Q96CM3 377 aaKnown RBP0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ASB9Q96DX5 294 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 SEC22AQ96IW7 307 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 BMFQ96LC9 184 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 NSMCE2Q96MF7 247 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 TSG101Q99816 390 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 P2RY13Q9BPV8 354 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 TBCDQ9BTW9 1192 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 RNF126Q9BV68 326 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ULBP2Q9BZM5 246 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 POLR1EQ9GZS1 481 aaKnown RBP0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 SIRPDQ9H106 197 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF430Q9H8G1 570 aaPredicted RBP0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 SIAEQ9HAT2 523 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 GLRX2Q9NS18 164 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 SOHLH2Q9NX45 425 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 P2RX2Q9UBL9 471 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 MARCOQ9UEW3 520 aaPredicted RBP0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 OPN4Q9UHM6 478 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ATP6V1HQ9UI12 483 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 XPO7Q9UIA9 1087 aaKnown RBP0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 CARMIL3Q8ND23 1372 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 SH3TC1Q8TE82 1336 aa0.65□□□□□ -2.3
SNORD28B-201ENST00000390993 CLSPNQ9HAW4 1339 aa0.65□□□□□ -2.3
SNORD28B-201ENST00000390993 DOCK9Q9BZ29 2069 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 A0A0U1RRA0 63 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 LRRC30A6NM36 301 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 COLCA2A8K830 154 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 H3BMQ9 156 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 KIF2AO00139 706 aaPredicted RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 AGPAT2O15120 278 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 RRP8O43159 456 aaKnown RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 HCRTR1O43613 425 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 DUX1O43812 170 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 B4GALT2O60909 372 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 SS18L1O75177 396 aaPredicted RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 GOSR1O95249 250 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 ADCY5O95622 1261 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 ALPPP05187 535 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 RRASP10301 218 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 GLULP15104 373 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 PRDX2P32119 198 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 RFC4P35249 363 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 CXCL5P42830 114 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 DLX1P56177 255 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 HSD17B7P56937 341 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 TGFBR3Q03167 851 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 FUT7Q11130 342 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 RPA4Q13156 261 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 GRB7Q14451 532 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 GNMTQ14749 295 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 PSG5Q15238 335 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 ATP6AP1Q15904 470 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 TMEM183BQ1AE95 376 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 SAMD4BQ5PRF9 694 aaKnown RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 TIGD3Q6B0B8 471 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 BRD3OSQ6XYD6 125 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF621Q6ZSS3 439 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 TMEM26Q6ZUK4 368 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 CYS1Q717R9 158 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 CENPUQ71F23 418 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 BHLHA15Q7RTS1 189 aaPredicted RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 TPRA1Q86W33 373 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 RALGPS2Q86X27 583 aaPredicted RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 TMEM183AQ8IXX5 376 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 CCDC170Q8IYT3 715 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 SVOPLQ8N434 492 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 NPBQ8NG41 125 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 OR1N2Q8NGR9 330 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 OR9G1Q8NH87 305 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF461Q8TAF7 563 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 PNPT1Q8TCS8 783 aaKnown RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 RPL3LQ92901 407 aaKnown RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 MYLPFQ96A32 169 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 VMP1Q96GC9 406 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 HPDLQ96IR7 371 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 CELF6Q96J87 481 aaKnown RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 AKR1E2Q96JD6 320 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 VSTM2LQ96N03 204 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 CITED1Q99966 193 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 TMEM121Q9BTD3 319 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 NAT9Q9BTE0 207 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 GSDMCQ9BYG8 508 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 C2orf40Q9H1Z8 148 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 SPNS1Q9H2V7 528 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 CDC42EP4Q9H3Q1 356 aaKnown RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 CLMPQ9H6B4 373 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 VCPKMTQ9H867 229 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 GPN2Q9H9Y4 310 aaPredicted RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 WFDC1Q9HC57 220 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 SIRT7Q9NRC8 400 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 B3GNT2Q9NY97 397 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 UTP6Q9NYH9 597 aaKnown RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 WRAP73Q9P2S5 460 aaPredicted RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 KIF25Q9UIL4 384 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 HOOK1Q9UJC3 728 aaKnown RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 GGA2Q9UJY4 613 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 ANGPTL2Q9UKU9 493 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 COPS3Q9UNS2 423 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms