RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 RAB11BQ15907 218 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 OR52N1Q8NH53 320 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 DVL3Q92997 716 aaPredicted RBP13.28□□□□□ -0.28
RTF1-201ENST00000389629 PDCD1LG2Q9BQ51 273 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 TRAF4Q9BUZ4 470 aaPredicted RBP13.28□□□□□ -0.28
RTF1-201ENST00000389629 ASCC3Q8N3C0 2202 aaKnown RBP13.28□□□□□ -0.28
RTF1-201ENST00000389629 KCNE1BA0A087WTH5 132 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 HMGN4O00479 90 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 KHNYNO15037 678 aaKnown RBP13.28□□□□□ -0.28
RTF1-201ENST00000389629 YY2O15391 372 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 SNAPINO95295 136 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 RHOP08100 348 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 ADRB3P13945 408 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 GZMMP51124 257 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 RAB2AP61019 212 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 SQSTM1Q13501 440 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 DYRK1AQ13627 763 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 FAM74A1Q5RGS3 127 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 OR5M10Q6IEU7 315 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 OR1J4Q8NGS1 313 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 CRB3Q9BUF7 120 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 AUNIPQ9H7T9 357 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 PLEKHB1Q9UF11 243 aaPredicted RBP13.28□□□□□ -0.28
RTF1-201ENST00000389629 SSX5O60225 188 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 IFNA21P01568 189 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 CRMP1Q14194 572 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 MRPL58Q14197 206 aaKnown RBP13.27□□□□□ -0.28
RTF1-201ENST00000389629 UBE2NLQ5JXB2 153 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 LRFN4Q6PJG9 635 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 NKAIN4Q8IVV8 208 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 ESX1Q8N693 406 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 CAMKVQ8NCB2 501 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 HCAR2Q8TDS4 363 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 TCTEX1D2Q8WW35 142 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 NKX6-2Q9C056 277 aaPredicted RBP13.27□□□□□ -0.28
RTF1-201ENST00000389629 CHST8Q9H2A9 424 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 DHDHQ9UQ10 334 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 HEBP2Q9Y5Z4 205 aa13.27□□□□□ -0.28
RTF1-201ENST00000389629 CDC123O75794 336 aaPredicted RBP13.27□□□□□ -0.29
RTF1-201ENST00000389629 SOD1P00441 154 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 ADRB1P08588 477 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 CSF1P09603 554 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 C19orf57Q0VDD7 668 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 EIF4EBP2Q13542 120 aaPredicted RBP13.27□□□□□ -0.29
RTF1-201ENST00000389629 RAB11FIP2Q7L804 512 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 SLC22A18Q96BI1 424 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 ARHGAP9Q9BRR9 750 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 MARVELD1Q9BSK0 173 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 DNTTIP1Q9H147 329 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 MIXL1Q9H2W2 232 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 ISG20L2Q9H9L3 353 aaKnown RBP13.27□□□□□ -0.29
RTF1-201ENST00000389629 NOX4Q9NPH5 578 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 HINT3Q9NQE9 182 aaKnown RBP13.27□□□□□ -0.29
RTF1-201ENST00000389629 NIT2Q9NQR4 276 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 OR52A4PA6NMU1 304 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 HEPACAM2A8MVW5 462 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 CLDN4O14493 209 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 B4GALT2O60909 372 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 APODP05090 189 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 CXCR1P25024 350 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 NRG3P56975 720 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 RBMS2Q15434 407 aaKnown RBP13.27□□□□□ -0.29
RTF1-201ENST00000389629 ITPRIPL2Q3MIP1 535 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 ARHGAP40Q5TG30 622 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 ZNF585AQ6P3V2 769 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 METTL21AQ8WXB1 218 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 UBQLN3Q9H347 655 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 DPEP2Q9H4A9 486 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 SLC6A20Q9NP91 592 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 NTNG1Q9Y2I2 539 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 TVP23AA6NH52 213 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 D6RAR5 112 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 PRSS44E7EML9 344 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 APOC1P02654 83 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 SNRNP70P08621 437 aaKnown RBP13.27□□□□□ -0.29
RTF1-201ENST00000389629 RPS27AP62979 156 aaKnown RBP13.27□□□□□ -0.29
RTF1-201ENST00000389629 UBA52P62987 128 aaKnown RBP13.27□□□□□ -0.29
RTF1-201ENST00000389629 GLB1L2Q8IW92 636 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 MS4A8Q9BY19 250 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 RNF186Q9NXI6 227 aa13.27□□□□□ -0.29
RTF1-201ENST00000389629 AGAP14A8MT82 685 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 A8MVJ9 347 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 CSTAP01040 98 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 HLA-AP01891 365 aaKnown RBP13.26□□□□□ -0.29
RTF1-201ENST00000389629 ZNF20P17024 532 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 NTHL1P78549 312 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 ASPGQ86U10 573 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 OR8D4Q8NGM9 314 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 ZBTB8AQ96BR9 441 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 ARSGQ96EG1 525 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 VRK1Q99986 396 aaPredicted RBP13.26□□□□□ -0.29
RTF1-201ENST00000389629 WSB2Q9NYS7 404 aaPredicted RBP13.26□□□□□ -0.29
RTF1-201ENST00000389629 RAE1P78406 368 aaKnown RBP13.26□□□□□ -0.29
RTF1-201ENST00000389629 LTBQ06643 244 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 NOGQ13253 232 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 ELAVL3Q14576 367 aaKnown RBP13.26□□□□□ -0.29
RTF1-201ENST00000389629 DHCR24Q15392 516 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 NKAPLQ5M9Q1 402 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 C1orf189Q5VU69 101 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 TMEM150AQ86TG1 271 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms