RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 FOXK1P85037 733 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 ZNF91Q05481 1191 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 SEC23BQ15437 767 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 STK11Q15831 433 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 SCGB2B2Q4G0G5 96 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 NKAIN4Q8IVV8 208 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 RNF113BQ8IZP6 322 aaKnown RBP12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 INTS14Q96SY0 518 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 TTYH1Q9H313 450 aaPredicted RBP12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 EXTL2Q9UBQ6 330 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 PSME4Q14997 1843 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 ZNF26P17031 533 aaPredicted RBP12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 TGFBR2P37173 567 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 STT3AP46977 705 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 TIAL1Q01085 375 aaKnown RBP eCLIP12.12□□□□□ -0.471e-6■■■■□ 22.3
PTPRN2-202ENST00000389416 EXT1Q16394 746 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 MBOAT2Q6ZWT7 520 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 ARMC10Q8N2F6 343 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 MED28Q9H204 178 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 CTSFQ9UBX1 484 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 CAMK2AQ9UQM7 478 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 NINQ8N4C6 2090 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 TAF4O00268 1085 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 NRG2O14511 850 aaPredicted RBP12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 KCNK2O95069 426 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 POLR2HP52434 150 aaKnown RBP12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 TUBA3EQ6PEY2 450 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 SPARTQ8N0X7 666 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 KDM8Q8N371 416 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 NXF5Q9H1B4 397 aaKnown RBP12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 FAM60AQ9NP50 221 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 NTNG1Q9Y2I2 539 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 PRAMEF25A6NGN4 478 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 CHRM4P08173 479 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 HOXC4P09017 264 aaPredicted RBP12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 PHC1P78364 1004 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 ZNF691Q5VV52 312 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 VASNQ6EMK4 673 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 FAM199XQ6PEV8 388 aaPredicted RBP12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 UGT2A3Q6UWM9 527 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 DNAJC5GQ8N7S2 189 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 FAM71F1Q96KD3 344 aaPredicted RBP12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 TTC28Q96AY4 2481 aa12.12□□□□□ -0.47
PTPRN2-202ENST00000389416 CENPBD1B2RD01 187 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 PATE3B3GLJ2 98 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 ORC5O43913 435 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 ITGAMP11215 1152 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 FOLR1P15328 257 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 RAB15P59190 212 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 GPR139Q6DWJ6 353 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 CPEB2Q7Z5Q1 589 aaKnown RBP12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 SPRED1Q7Z699 444 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 MISPQ8IVT2 679 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 DTWD2Q8NBA8 298 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 OR13C3Q8NGS6 347 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 TMEM163Q8TC26 289 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 OR2A5Q96R48 311 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 ULBP2Q9BZM5 246 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 MMP27Q9H306 513 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 ENAMQ9NRM1 1142 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 STUB1Q9UNE7 303 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 PLEKHA6Q9Y2H5 1048 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 ABCA7Q8IZY2 2146 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 PPICP45877 212 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 KIAA0040Q15053 153 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 ZNF829Q3KNS6 432 aaPredicted RBP12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 SFTPA2Q8IWL1 248 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 KLHDC8BQ8IXV7 354 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 SPRYD4Q8WW59 207 aaPredicted RBP12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 CPNE2Q96FN4 548 aaPredicted RBP12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 S1PR5Q9H228 398 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 UBAP1Q9NZ09 502 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 SLC7A11Q9UPY5 501 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 CMAHPQ9Y471 501 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 A0A0A6YYD5 115 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 ARGFXA6NJG6 315 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 PLOD2O00469 737 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 PHYHO14832 338 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 CSO75390 466 aaKnown RBP12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 LGI1O95970 557 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 APOC1P02654 83 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 TRAM1Q15629 374 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 AKAP14Q86UN6 197 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 TIGD4Q8IY51 512 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 OR5AK2Q8NH90 309 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 EVA1AQ9H8M9 152 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 SLC6A13Q9NSD5 602 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 GRIP1Q9Y3R0 1128 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 CRHBPP24387 322 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 CAMK2DQ13557 499 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 CRMP1Q14194 572 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 BCL2L15Q5TBC7 163 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 B3GNT8Q7Z7M8 397 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 BCORP1Q8N888 145 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 GATA6Q92908 595 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 SEMA4GQ9NTN9 838 aa12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 MRPS2Q9Y399 296 aaKnown RBP12.11□□□□□ -0.47
PTPRN2-202ENST00000389416 IGHA2P01877 340 aa12.1□□□□□ -0.47
PTPRN2-202ENST00000389416 MMP11P24347 488 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms