RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 DEDD2Q8WXF8 326 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 HIST1H4GQ99525 98 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 POLR2J2Q9GZM3 115 aaKnown RBP1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 POLR2J3Q9H1A7 115 aaKnown RBP1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 RHBGQ9H310 441 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 CALHM2Q9HA72 323 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 SIGLEC8Q9NYZ4 499 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 PRPF19Q9UMS4 504 aaKnown RBP1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 ASF1AQ9Y294 204 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 TRIP11Q15643 1979 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 TTC21BQ7Z4L5 1316 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 PPIAL4EA0A075B759 164 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 IGKV1D-8A0A087WSZ0 117 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 GSAPA4D1B5 854 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 A6NDX4 124 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 ERVV-1B6SEH8 477 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 E7ESA3 106 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 NPIPA7E9PJI5 369 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 PPIAL4DF5H284 164 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 TPST2O60704 377 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 PTBP3O95758 552 aaKnown RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 NPIPA8P0DM63 369 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 PPIAL4FP0DN26 164 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 ARF4P18085 180 aaPredicted RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 MAGEA5P43359 124 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 KPNA2P52292 529 aaKnown RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 AP3M2P53677 418 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 UNC119Q13432 240 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 ARL6IP1Q15041 203 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 DNAJC21Q5F1R6 531 aaKnown RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 LDLRAP1Q5SW96 308 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 GPRC6AQ5T6X5 926 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 CCDC137Q6PK04 289 aaKnown RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 ZFP2Q6ZN57 461 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 TPRA1Q86W33 373 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 PNKDQ8N490 385 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 KIR3DL3Q8N743 410 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 Q8N9W7 124 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 ZNF540Q8NDQ6 660 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 OR10G3Q8NGC4 313 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 OR51G1Q8NGK1 321 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 PNPT1Q8TCS8 783 aaKnown RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 TCTEX1D2Q8WW35 142 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 GIMAP1Q8WWP7 306 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 MRPS31Q92665 395 aaKnown RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 RPL3LQ92901 407 aaKnown RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 RPUSD4Q96CM3 377 aaKnown RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 TIMD4Q96H15 378 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 C12orf66Q96MD2 445 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 GAL3ST1Q99999 423 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 RTBDNQ9BSG5 229 aaPredicted RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 CRNKL1Q9BZJ0 848 aaKnown RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 RSPH9Q9H1X1 276 aaPredicted RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 C1orf21Q9H246 121 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 VCXQ9H320 206 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 TPK1Q9H3S4 243 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 DBNDD1Q9H9R9 158 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 NGBQ9NPG2 151 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 LHX9Q9NQ69 397 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 STOX2Q9P2F5 926 aaPredicted RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 MTRF1LQ9UGC7 380 aaKnown RBP1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 PHF11Q9UIL8 331 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 TBX21Q9UL17 535 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 NPIPA1Q9UND3 350 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 CLCA3PQ9Y6N3 262 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 TICRRQ7Z2Z1 1910 aa1.26□□□□□ -2.21
RNU6-541P-201ENST00000384709 ATP10AO60312 1499 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 CARMIL3Q8ND23 1372 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 GAKO14976 1311 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 CLSPNQ9HAW4 1339 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 IGHV1OR21-1A0A087WYE8 117 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 A0A0G2JN53 185 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 E9PBE3 544 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 CCER2I3L3R5 266 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 FCN1O00602 326 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 AIREO43918 545 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 CXCL13O43927 109 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 FOXH1O75593 365 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 MOSP00540 346 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 ICAM2P13598 275 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 CCNCP24863 283 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 KLK7P49862 253 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 ZNF136P52737 540 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 SH3BGRP55822 239 aaPredicted RBP1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 DLX1P56177 255 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 PRPS1P60891 318 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 EWSR1Q01844 656 aaKnown RBP eCLIP1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 MADCAM1Q13477 382 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 ARFRP1Q13795 201 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 XKR4Q5GH76 650 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 C6orf120Q7Z4R8 191 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 RALGPS2Q86X27 583 aaPredicted RBP1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 RDH10Q8IZV5 341 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 LYPD1Q8N2G4 141 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 ZNF561Q8N587 486 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 DUSP18Q8NEJ0 188 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 KIR2DL5BQ8NHK3 375 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 ZNF596Q8TC21 504 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 MGARPQ8TDB4 240 aa1.25□□□□□ -2.21
RNU6-541P-201ENST00000384709 FAM3CQ92520 227 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms