RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 MTDHQ86UE4 582 aaKnown RBP8.29□□□□□ -1.08
HMGN1-202ENST00000380747 KRT73Q86Y46 540 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF440Q8IYI8 595 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 GCNT2Q8N0V5 402 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 CLIP4Q8N3C7 705 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 METTL25Q8N6Q8 603 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 POU5F2Q8N7G0 328 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 FAM71CQ8NEG0 241 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 OR10D3Q8NH80 312 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 FNDC9Q8TBE3 224 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 ST8SIA1Q92185 356 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 OSTF1Q92882 214 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 C14orf79Q96F83 325 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 SLC39A3Q9BRY0 314 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 BCL2L10Q9HD36 194 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 SERINC1Q9NRX5 453 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 ACER3Q9NUN7 267 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 RLIMQ9NVW2 624 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 CLCF1Q9UBD9 225 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 IFT52Q9Y366 437 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 GMEB1Q9Y692 573 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 CDHR4A6H8M9 788 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 CFAP73A6NFT4 308 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 EEF1E1-BLOC1S5C9J1V9 151 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 EEF1E1O43324 174 aaKnown RBP8.28□□□□□ -1.08
HMGN1-202ENST00000380747 ADAM11O75078 769 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 NTN1O95631 604 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 GKN3PP0CG01 181 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 TFPIP10646 304 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 FCGR2AP12318 317 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 SLC7A1P30825 629 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 OPRM1P35372 400 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 CARD18P57730 90 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 EEF1A1P68104 462 aaKnown RBP8.28□□□□□ -1.08
HMGN1-202ENST00000380747 SIRPAP78324 504 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 EPS8Q12929 822 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 ZSWIM7Q19AV6 140 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 RABL3Q5HYI8 236 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 COQ5Q5HYK3 327 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 RNF220Q5VTB9 566 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 OR2A2Q6IF42 318 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 NANOGP8Q6NSW7 305 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 C3orf33Q6P1S2 294 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF550Q7Z398 422 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 GRINAQ7Z429 371 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 CADM2Q8N3J6 435 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 CNEP1R1Q8N9A8 125 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 PCYOX1LQ8NBM8 494 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 RELL2Q8NC24 303 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-202ENST00000380747 C11orf65Q8NCR3 313 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 HIPK4Q8NE63 616 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 LRRC58Q96CX6 371 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 RCN3Q96D15 328 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 ADGRG7Q96K78 797 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 ZFP3Q96NJ6 502 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 OR5B2Q96R09 309 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 SH3GL1Q99961 368 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 SPATA5L1Q9BVQ7 753 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 SFXN3Q9BWM7 321 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 SPATA9Q9BWV2 254 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 PIF1Q9H611 641 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 TMEM38AQ9H6F2 299 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 ARMC7Q9H6L4 198 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 NANOGQ9H9S0 305 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 CTPS2Q9NRF8 586 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 GID8Q9NWU2 228 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 PAQR5Q9NXK6 330 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF629Q9UEG4 869 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-202ENST00000380747 MCTS1Q9ULC4 181 aaKnown RBP8.28□□□□□ -1.08
HMGN1-202ENST00000380747 ANGPT4Q9Y264 503 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF175Q9Y473 711 aa8.28□□□□□ -1.08
HMGN1-202ENST00000380747 SPIN1Q9Y657 262 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-202ENST00000380747 DNAJC13O75165 2243 aa8.27□□□□□ -1.08
HMGN1-202ENST00000380747 FREM3P0C091 2139 aa8.27□□□□□ -1.08
HMGN1-202ENST00000380747 TMED7-TICAM2A0A0A6YYA0 188 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 A0A1W2PNV4 684 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 J3QW42 95 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 ETV2O00321 342 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-202ENST00000380747 AIM2O14862 343 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 ADAMDEC1O15204 470 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 FRS3O43559 492 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 SNX3O60493 162 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 SMNDC1O75940 238 aaKnown RBP eCLIP8.27□□□□□ -1.094e-7■■■■□ 21.6
HMGN1-202ENST00000380747 AQP8O94778 261 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 IL18BPO95998 194 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 PLGP00747 810 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-202ENST00000380747 COX4I1P13073 169 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 ETS2P15036 469 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 TACR3P29371 465 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 PRKAR1BP31321 381 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 UQCRC1P31930 480 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 APOBEC1P41238 236 aaKnown RBP8.27□□□□□ -1.09
HMGN1-202ENST00000380747 MAP2K3P46734 347 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 CPA2P48052 419 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 ASCL1P50553 236 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 POLR2HP52434 150 aaKnown RBP8.27□□□□□ -1.09
HMGN1-202ENST00000380747 COPZ1P61923 177 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 TFF3Q07654 80 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 RBBP4Q09028 425 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 ADRM1Q16186 407 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms