RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 CASP7P55210 303 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 EBPQ15125 230 aaKnown RBP11.64□□□□□ -0.55
CHD3-203ENST00000380358 PHLDA2Q53GA4 152 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 MFSD12Q6NUT3 480 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 ZADH2Q8N4Q0 377 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 FAM213BQ8TBF2 198 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 INTS14Q96SY0 518 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 GPR22Q99680 433 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 DHCR7Q9UBM7 475 aaKnown RBP11.64□□□□□ -0.55
CHD3-203ENST00000380358 LRRC10BA6NIK2 292 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 RFC3P40938 356 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 CXADRP78310 365 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 NADSYN1Q6IA69 706 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 OR52E1Q8NGJ3 308 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 OSBPL7Q9BZF2 842 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 TMEM269A0A1B0GVZ9 245 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 FAM159BA6NKW6 160 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 ERP29P30040 261 aaKnown RBP11.64□□□□□ -0.55
CHD3-203ENST00000380358 AHRP35869 848 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 PDZD11Q5EBL8 140 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 GDPD3Q7L5L3 318 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 DEDD2Q8WXF8 326 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 SNAPC3Q92966 411 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 SEC22AQ96IW7 307 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 MRGPRX2Q96LB1 330 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 FAM210AQ96ND0 272 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 SLC6A14Q9UN76 642 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 NME7Q9Y5B8 376 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 ADAMTS13Q76LX8 1427 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 KLHL33A6NCF5 533 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 FANCGO15287 622 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 PTHP01270 115 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 BMPR1AP36894 532 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 SPINT3P49223 89 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 VEGFBP49765 207 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 ATP1B3P54709 279 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 CLDN12P56749 244 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 COQ5Q5HYK3 327 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 FRMD1Q8N878 549 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 NETO1Q8TDF5 533 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 URGCP-MRPS24S4R325 110 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 ARL2-SNX15V9GYD0 113 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 IGHV3-20A0A0C4DH32 117 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 NCBP2LA6PVI3 153 aaKnown RBP11.63□□□□□ -0.55
CHD3-203ENST00000380358 MVKQ03426 396 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 OR10AD1Q8NGE0 317 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 SELENOIQ9C0D9 397 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 CDCP1Q9H5V8 836 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 EBF1Q9UH73 591 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 IGLV3-22A0A075B6J6 115 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 SUSD5O60279 629 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 SLC43A1O75387 559 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 OXSR1O95747 527 aaPredicted RBP11.63□□□□□ -0.55
CHD3-203ENST00000380358 ABHD16AO95870 558 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 LGI1O95970 557 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 PMP2P02689 132 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 CD1DP15813 335 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 FADDQ13158 208 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 AAED1Q7RTV5 226 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 NR4A3Q92570 626 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 UPRTQ96BW1 309 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 COQ10AQ96MF6 247 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 C20orf24Q9BUV8 137 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 ZMAT3Q9HA38 289 aaKnown RBP11.63□□□□□ -0.55
CHD3-203ENST00000380358 LGALS13Q9UHV8 139 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 PURGQ9UJV8 347 aaKnown RBP11.63□□□□□ -0.55
CHD3-203ENST00000380358 MCRIP1C9JLW8 97 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 PRAMEF26H0Y7S4 382 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 TK1P04183 234 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 TAS2R30P59541 319 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 UBE2IP63279 158 aaKnown RBP11.63□□□□□ -0.55
CHD3-203ENST00000380358 IRF4Q15306 451 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 HACD4Q5VWC8 232 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 TSSK4Q6SA08 328 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 C4orf32Q8N8J7 132 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 ANKRD9Q96BM1 317 aaPredicted RBP11.63□□□□□ -0.55
CHD3-203ENST00000380358 TRIB1Q96RU8 372 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 MRIQ9BWK5 157 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 AMBRA1Q9C0C7 1298 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 ELOVL3Q9HB03 270 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 RPL7P18124 248 aaKnown RBP11.63□□□□□ -0.55
CHD3-203ENST00000380358 HOXA11P31270 313 aaPredicted RBP11.63□□□□□ -0.55
CHD3-203ENST00000380358 UBE2KP61086 200 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 ACKR1Q16570 336 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 DEFB109BQ30KR1 87 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 CAMKMTQ7Z624 323 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 COPS3Q9UNS2 423 aa11.63□□□□□ -0.55
CHD3-203ENST00000380358 NSA2O95478 260 aaKnown RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 CD6P30203 668 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 SLC25A11Q02978 314 aaKnown RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 S100A7AQ86SG5 101 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 CHTF18Q8WVB6 975 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 GIMAP1Q8WWP7 306 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 RIMS3Q9UJD0 308 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 PPP1R3CQ9UQK1 317 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 NRG2O14511 850 aaPredicted RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 RPL13AP40429 203 aaKnown RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 C18orf63Q68DL7 685 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 ZFAND4Q86XD8 727 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 CHDHQ8NE62 594 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms