RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 FAM69BQ5VUD6 431 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 C19orf48Q6RUI8 117 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 ATCAYQ86WG3 371 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 OR4F15Q8NGB8 312 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 DYNC2LI1Q8TCX1 351 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 PTP4A1Q93096 173 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 DEPDC7Q96QD5 511 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 HCAR1Q9BXC0 346 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 PCDHGA5Q9Y5G8 931 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 WDFY3Q8IZQ1 3526 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 EIF4E2O60573 245 aaKnown RBP18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 KLK3P07288 261 aaPredicted RBP18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 ITPKBP27987 946 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 EVI2BP34910 448 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 SLC1A3P43003 542 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 SLC6A8P48029 635 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 SLC9A3P48764 834 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 PSPHP78330 225 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 C1DQ13901 141 aaKnown RBP18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 PLA2G2CQ5R387 149 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 NUBPLQ8TB37 319 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 ZHX1-C8orf76Q96EF9 292 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 ADAM19Q9H013 955 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 CHCHD3Q9NX63 227 aaKnown RBP18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 BAIAP2Q9UQB8 552 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 EXOGQ9Y2C4 368 aaKnown RBP18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 PCDHGA3Q9Y5H0 932 aa18.12■□□□□ 0.49
PDLIM5-205ENST00000380180 TRBV11-1A0A0K0K1C0 115 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 LOC100506127A0A0U1RQW1 187 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 TMEM200CA6NKL6 621 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 FLRT2O43155 660 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 SCO2O43819 266 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 NDUFB2O95178 105 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 PEPDP12955 493 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 TACR3P29371 465 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 SOX3P41225 446 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 ENTPD1P49961 510 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 TOMM34Q15785 309 aaPredicted RBP18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 B3GLCTQ6Y288 498 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 GID4Q8IVV7 300 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 SLC43A2Q8N370 569 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 OR5M3Q8NGP4 307 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 TMEM43Q9BTV4 400 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 RACGAP1Q9H0H5 632 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 WDR54Q9H977 334 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 ZNF337Q9Y3M9 751 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 R4GN57 208 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 WWP2O00308 870 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 OR7A10O76100 309 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 NOS3P29474 1203 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 LIMK1P53667 647 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 SLC26A5P58743 744 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 DBPQ10586 325 aaPredicted RBP18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 ITGADQ13349 1161 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 SOWAHCQ53LP3 525 aaPredicted RBP18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 OR2G6Q5TZ20 316 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 NIPAL3Q6P499 406 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 MEPCEQ7L2J0 689 aaKnown RBP18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 SLC37A3Q8NCC5 494 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 CHCHD6Q9BRQ6 235 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 ULBP3Q9BZM4 244 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 C19orf25Q9UFG5 118 aaPredicted RBP18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 GPN3Q9UHW5 284 aaPredicted RBP18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 EXOSC1Q9Y3B2 195 aaKnown RBP18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 TTC28Q96AY4 2481 aa18.11■□□□□ 0.49
PDLIM5-205ENST00000380180 TMEM129A0AVI4 362 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 RIIAD1A6NNX1 92 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 PRR23D1E9PI22 279 aaPredicted RBP18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 LIMS3P0CW19 117 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 LIMS4P0CW20 117 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 PRR23D2P0DMB1 279 aaPredicted RBP18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 HK1P19367 917 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 ENDOUP21128 410 aaKnown RBP18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 EGR4Q05215 589 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 LHFPL3Q86UP9 236 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 IGFN1Q86VF2 1251 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 MR1Q95460 341 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 ERMAPQ96PL5 475 aaPredicted RBP18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 CENPOQ9BU64 300 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 DCSTAMPQ9H295 470 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 RNF167Q9H6Y7 350 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 SLC39A1Q9NY26 324 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 TEX51A0A1B0GUA7 166 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 ZC3H12DA2A288 527 aaKnown RBP18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 HTR3EA5X5Y0 456 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 MCIDASD6RGH6 385 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 NUDT14O95848 222 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 CYC1P08574 325 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 ATP6V1E1P36543 226 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 WNT4P56705 351 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 FBXW4P57775 412 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 MLLT11Q13015 90 aaPredicted RBP18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 DGUOKQ16854 277 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 GXYLT1Q4G148 440 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 CYB561A3Q8NBI2 242 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 OR8K3Q8NH51 312 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 OR5W2Q8NH69 310 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 DUSP19Q8WTR2 217 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 LRFN5Q96NI6 719 aa18.1■□□□□ 0.49
PDLIM5-205ENST00000380180 CHRNA9Q9UGM1 479 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms