RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 GRAMD2AQ8IUY3 354 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 ACBD7Q8N6N7 88 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 BCORP1Q8N888 145 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF615Q8N8J6 731 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 ZSCAN1Q8NBB4 408 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 OR52N1Q8NH53 320 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 RNF31Q96EP0 1072 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF285Q96NJ3 590 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 WDFY2Q96P53 400 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 TEAD3Q99594 435 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 FN3KQ9H479 309 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 MCCC2Q9HCC0 563 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 TRAPPC4Q9Y296 219 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 PCNX3Q9H6A9 2034 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 FER1L5A0AVI2 2057 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 COL6A3P12111 3177 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 TRIOBPQ9H2D6 2365 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC35F4A4IF30 521 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 PRR23D1E9PI22 279 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 E9PI62 339 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 CLDN4O14493 209 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 AKAP8O43823 692 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 IFNA16P05015 189 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 PRR23D2P0DMB1 279 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 PAICSP22234 425 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 CD1CP29017 333 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 RPS7P62081 194 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 ACSM1Q08AH1 577 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 SMAD4Q13485 552 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF141Q15928 474 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 GLYR1Q49A26 553 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 GXYLT1Q4G148 440 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 LINC00114Q6XXX2 140 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 GKN2Q86XP6 184 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 MARCH9Q86YJ5 346 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 GID4Q8IVV7 300 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 LSMEM1Q8N8F7 131 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 GATSQ8NAP1 163 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 OR10H4Q8NGA5 316 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 RELTQ969Z4 430 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 EFHD2Q96C19 240 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 MSANTD3Q96H12 275 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 ABHD8Q96I13 439 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 NEDD4LQ96PU5 975 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 MED18Q9BUE0 208 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 CCDC32Q9BV29 185 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 ALG8Q9BVK2 526 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 SRRQ9GZT4 340 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 C14orf105Q9NVL8 296 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 MRPS33Q9Y291 106 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 CLCA3PQ9Y6N3 262 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 ARID1BQ8NFD5 2236 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 FAM86C2PA6NEL3 165 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 AGRPO00253 132 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 CASKO14936 926 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 PRAMEF2O60811 474 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 MYF5P13349 255 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC2A5P22732 501 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 NUDT1P36639 197 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 EIF2B2P49770 351 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 HCCSP53701 268 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 ATP12AP54707 1039 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 FUT7Q11130 342 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 FAM131AQ6UXB0 335 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 NRARPQ7Z6K4 114 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 C17orf82Q86X59 251 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 RFLNBQ8N5W9 214 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 ATP6V1C2Q8NEY4 427 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 OR6C4Q8NGE1 309 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 DNAJA4Q8WW22 397 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 DIRAS2Q96HU8 199 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 JAM3Q9BX67 310 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 PPIL3Q9H2H8 161 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 Q9N2J8 555 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 PLCL2Q9UPR0 1127 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 TMEM5Q9Y2B1 443 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 GSTK1Q9Y2Q3 226 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 LILRA5A6NI73 299 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 A8MUA0 341 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 IMPA2O14732 288 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 HCN1O60741 890 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 CSTAP01040 98 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 IL7P13232 177 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 HOXB1P14653 301 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 OR1D4P47884 311 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 CSNK1EP49674 416 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 EFNA3P52797 238 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 RPL6Q02878 288 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 SELENBP1Q13228 472 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 SSX6Q7RTT6 188 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 NR2C2APQ86WQ0 139 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 OR5M3Q8NGP4 307 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 OR4C6Q8NH72 309 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 NEIL3Q8TAT5 605 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF524Q96C55 264 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 KLHDC3Q9BQ90 382 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 TTTY10Q9BZA0 68 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 TRIM2Q9C040 744 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 UBE2ZQ9H832 354 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms