RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ATP6V1HQ9UI12 483 aa15.58■□□□□ 0.08
PDLIM4-202ENST00000379018 MKLN1Q9UL63 735 aa15.58■□□□□ 0.08
PDLIM4-202ENST00000379018 MOKQ9UQ07 419 aa15.58■□□□□ 0.08
PDLIM4-202ENST00000379018 TMED5Q9Y3A6 229 aa15.58■□□□□ 0.08
PDLIM4-202ENST00000379018 IGKV3D-15A0A087WSY6 115 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 SMIM23A6NLE4 172 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 PGCP20142 388 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 NR4A2P43354 598 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 PTGR1Q14914 329 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 WHAMMP3Q1A5X7 153 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 CR1LQ2VPA4 569 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 CCDC153Q494R4 210 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 SLC46A3Q7Z3Q1 461 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 HMGN2P46Q86SG4 172 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 C10orf107Q8IVU9 208 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 CLEC4FQ8N1N0 589 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 WDR31Q8NA23 367 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 MZB1Q8WU39 189 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 SLC25A43Q8WUT9 341 aaPredicted RBP15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 TWIST2Q8WVJ9 160 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 C1orf159Q96HA4 380 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 ARL5BQ96KC2 179 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 SDF2Q99470 211 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 MALT1Q9UDY8 824 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 KCNE5Q9UJ90 142 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 DNAJC15Q9Y5T4 150 aa15.57■□□□□ 0.08
PDLIM4-202ENST00000379018 VWC2LB2RUY7 222 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 TMEM114B3SHH9 223 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 ETV2O00321 342 aaPredicted RBP15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 GPR171O14626 319 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 PIP5K1BO14986 540 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 PEX11AO75192 247 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 SNRPD2P62316 118 aaKnown RBP15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 RUNX1T1Q06455 604 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 SQLEQ14534 574 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 LSM12Q3MHD2 195 aaKnown RBP15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 KANK2Q63ZY3 851 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 KLHL24Q6TFL4 600 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 TRMT10CQ7L0Y3 403 aaKnown RBP15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 KRTCAP2Q8N6L1 136 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 SFXN5Q8TD22 340 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 C16orf45Q96MC5 204 aaPredicted RBP15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 MUS81Q96NY9 551 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 SLC17A5Q9NRA2 495 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 ACER3Q9NUN7 267 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 CHRNA9Q9UGM1 479 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 AMDHD2Q9Y303 409 aa15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 SPIN1Q9Y657 262 aaPredicted RBP15.56■□□□□ 0.08
PDLIM4-202ENST00000379018 KLF11O14901 512 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 FCMRO60667 390 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 BCAS1O75363 584 aaPredicted RBP15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 MAPK1P28482 360 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 SRP14P37108 136 aaKnown RBP15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 RPL3P39023 403 aaKnown RBP15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 MAGEA8P43361 318 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 PDK3Q15120 406 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 VHLLQ6RSH7 139 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 C16orf62Q7Z3J2 963 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 SPATA19Q7Z5L4 167 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 SOX7Q9BT81 388 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 GATA5Q9BWX5 397 aaPredicted RBP15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 BPESC1Q9GZL8 116 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 NMUR2Q9GZQ4 415 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 SERHL2Q9H4I8 314 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 SLC7A10Q9NS82 523 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 ATAD3AQ9NVI7 634 aa15.55■□□□□ 0.08
PDLIM4-202ENST00000379018 LRP5LA4QPB2 252 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 NDUFS8O00217 210 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 COPEO14579 308 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 STX11O75558 287 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 UGT2B17O75795 530 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 SLU7O95391 586 aaKnown RBP15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 PMS2P2O95744 297 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 PGRP06401 933 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 CHRNGP07510 517 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 ITGA2P17301 1181 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 MATN1P21941 496 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 CCT5P48643 541 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 EIF3MQ7L2H7 374 aaKnown RBP15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 SLC35G5Q96KT7 338 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 KCNS3Q9BQ31 491 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 CCDC106Q9BWC9 280 aa15.54■□□□□ 0.08
PDLIM4-202ENST00000379018 TCF21O43680 179 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 FAM153BP0C7A2 387 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 APOBEC1P41238 236 aaKnown RBP15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 PRPS1P60891 318 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 HBA1P69905 142 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 ZNF141Q15928 474 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 MAPK14Q16539 360 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 SWI5Q1ZZU3 235 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 MST1LQ2TV78 715 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 PGS1Q32NB8 556 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 FAM153CQ494X1 144 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 HIKESHIQ53FT3 197 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 TSPO2Q5TGU0 170 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 C4orf33Q8N1A6 199 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 PSMA8Q8TAA3 256 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 MOAP1Q96BY2 351 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 PPP3R2Q96LZ3 170 aa15.53■□□□□ 0.08
PDLIM4-202ENST00000379018 RNF103-CHMP3A0A140T963 221 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms