RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PSMB1P20618 241 aaKnown RBP16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 PPIBP23284 216 aaKnown RBP16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 CRISP3P54108 245 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 RNPS1Q15287 305 aaKnown RBP16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 ACKR1Q16570 336 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 SHEQ5VZ18 495 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 WDR60Q8WVS4 1066 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 IGFBPL1Q8WX77 278 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 MAL2Q969L2 176 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 PIGTQ969N2 578 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 PIK3IP1Q96FE7 263 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 HS3ST6Q96QI5 342 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 SRXN1Q9BYN0 137 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 KLHL4Q9C0H6 718 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 COQ10BQ9H8M1 238 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 A4GALTQ9NPC4 353 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 THUMPD1Q9NXG2 353 aaKnown RBP16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 CALML5Q9NZT1 146 aa16.85■□□□□ 0.29
TMEM88B-201ENST00000378821 FPR1P21462 350 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 LSP1P33241 339 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 SFTPDP35247 375 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 KCNJ10P78508 379 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 CBFBQ13951 182 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 NFYCQ13952 458 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 QPRTQ15274 297 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 RUNDC3AQ59EK9 446 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 GCNT6Q5T4J0 391 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 ROBO4Q8WZ75 1007 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 THUMPD3Q9BV44 507 aaKnown RBP16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 MTHFD2LQ9H903 347 aaPredicted RBP16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 FANCFQ9NPI8 374 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 MRGBPQ9NV56 204 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 GPR52Q9Y2T5 361 aa16.84■□□□□ 0.29
TMEM88B-201ENST00000378821 DBIP07108 87 aaKnown RBP16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 ARAFP10398 606 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 GPX2P18283 190 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 RAC3P60763 192 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 NKX6-1P78426 367 aaPredicted RBP16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 SELENBP1Q13228 472 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 SELPLGQ14242 412 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 EXOC3L2Q2M3D2 409 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 TMEM176BQ3YBM2 270 aaPredicted RBP16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 ANKRD34AQ69YU3 496 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 C20orf204Q6ZNR8 217 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 SPATA21Q7Z572 469 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 STK32CQ86UX6 486 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 PEX5LQ8IYB4 626 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 GABRG1Q8N1C3 465 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 SLC43A2Q8N370 569 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 ABHD3Q8WU67 409 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 CNOT9Q92600 299 aaKnown RBP16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 PMM1Q92871 262 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 POM121Q96HA1 1249 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 ANKRD27Q96NW4 1050 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 CGREF1Q99674 301 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 ELAC2Q9BQ52 826 aaKnown RBP16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 FAM107BQ9H098 131 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 ARMCX1Q9P291 453 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 KLHL13Q9P2N7 655 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 CORO2BQ9UQ03 480 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 CAPN7Q9Y6W3 813 aa16.83■□□□□ 0.28
TMEM88B-201ENST00000378821 TMEM247A6NEH6 219 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 EVPLLA8MZ36 301 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 ADAM11O75078 769 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 GCM2O75603 506 aaPredicted RBP16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 PRKD3O94806 890 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 IL7RP16871 459 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 DRD4P21917 467 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 MTPNP58546 118 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 GNGT1P63211 74 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 GNA13Q14344 377 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 CAPRIN1Q14444 709 aaKnown RBP16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 BEX5Q5H9J7 111 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 MRPL2Q5T653 305 aaKnown RBP16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 REP15Q6BDI9 236 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 PPP4R4Q6NUP7 873 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 PRSS57Q6UWY2 283 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 TFAP2EQ6VUC0 442 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 ZNF836Q6ZNA1 936 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 FCRLAQ7L513 359 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 SNX32Q86XE0 403 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 VRK2Q86Y07 508 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 CMIPQ8IY22 773 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 OR52P1PQ8NH57 321 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 NFKBIDQ8NI38 313 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 ST8SIA1Q92185 356 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 TACO1Q9BSH4 297 aaKnown RBP16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 TMEM204Q9BSN7 226 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 HDHD5Q9BXW7 423 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 BCO1Q9HAY6 547 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 EXOSC3Q9NQT5 275 aaKnown RBP16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 ING1Q9UK53 422 aaPredicted RBP16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 DSCAMO60469 2012 aa16.82■□□□□ 0.28
TMEM88B-201ENST00000378821 A0A0G2JPF8 293 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 HNRNPCL2B2RXH8 293 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 HNRNPCL3B7ZW38 293 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 HNRNPCL1O60812 293 aaKnown RBP16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 YES1P07947 543 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 HNRNPCL4P0DMR1 293 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms