RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 FAM27E3Q08E93 113 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 ADRM1Q16186 407 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 RPS26P11Q5JNZ5 115 aaPredicted RBP15.16■□□□□ 0.02
RER1-202ENST00000378512 TMPPEQ6ZT21 453 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 FCRLAQ7L513 359 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 SLC43A2Q8N370 569 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 ZNF563Q8TA94 476 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 BBS10Q8TAM1 723 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 ABHD3Q8WU67 409 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 ROBO4Q8WZ75 1007 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 CPPED1Q9BRF8 314 aaPredicted RBP15.16■□□□□ 0.02
RER1-202ENST00000378512 SPATA9Q9BWV2 254 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 CXXC4Q9H2H0 198 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 BCO1Q9HAY6 547 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 MRGBPQ9NV56 204 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 OSGIN1Q9UJX0 560 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 PROCRQ9UNN8 238 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 CORO2BQ9UQ03 480 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 IFT52Q9Y366 437 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 NDUFAF1Q9Y375 327 aa15.16■□□□□ 0.02
RER1-202ENST00000378512 ABCA4P78363 2273 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 TMEM247A6NEH6 219 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 SMAD9O15198 467 aaKnown RBP15.15■□□□□ 0.02
RER1-202ENST00000378512 TROVE2P10155 538 aaKnown RBP eCLIP15.15■□□□□ 0.025e-7■□□□□ 10.5
RER1-202ENST00000378512 SLC7A1P30825 629 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 DIO1P49895 249 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 LARS2Q15031 903 aaKnown RBP15.15■□□□□ 0.02
RER1-202ENST00000378512 POU4F3Q15319 338 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 HSP90B2PQ58FF3 399 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 CLIP4Q8N3C7 705 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 ATP6V1C2Q8NEY4 427 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 ANKRD27Q96NW4 1050 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 ZNF317Q96PQ6 595 aaPredicted RBP15.15■□□□□ 0.02
RER1-202ENST00000378512 FOXC2Q99958 501 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 PSD2Q9BQI7 771 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 TMUB1Q9BVT8 246 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 KLHL13Q9P2N7 655 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 CLEC4AQ9UMR7 237 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 HDGFL3Q9Y3E1 203 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 TESMINQ9Y4I5 508 aa15.15■□□□□ 0.02
RER1-202ENST00000378512 SPIN1Q9Y657 262 aaPredicted RBP15.15■□□□□ 0.02
RER1-202ENST00000378512 A0A1W2PPR1 153 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 ZNF208O43345 1280 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 DNPH1O43598 174 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 CYTIPO60759 359 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 PRKD3O94806 890 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 PMS2P2O95744 297 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 PLGP00747 810 aaPredicted RBP15.14■□□□□ 0.01
RER1-202ENST00000378512 ENPP1P22413 925 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 UGT2B10P36537 528 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 MDH1P40925 334 aaKnown RBP15.14■□□□□ 0.01
RER1-202ENST00000378512 CTBP2P56545 445 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 GCNT6Q5T4J0 391 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 NINJ1Q92982 152 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 ARL5BQ96KC2 179 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 OR5B2Q96R09 309 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 CGREF1Q99674 301 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 ZNF232Q9UNY5 417 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 TRAPPC4Q9Y296 219 aa15.14■□□□□ 0.01
RER1-202ENST00000378512 SH3D21A4FU49 640 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 EVPLLA8MZ36 301 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 FBP2O00757 339 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 CPOXP36551 454 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 POLR2HP52434 150 aaKnown RBP15.13■□□□□ 0.01
RER1-202ENST00000378512 ARFIP2P53365 341 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 CSNK2A1P68400 391 aaPredicted RBP15.13■□□□□ 0.01
RER1-202ENST00000378512 H3F3AP84243 136 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 CDK6Q00534 326 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 ABLIM2Q6H8Q1 611 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 REEP3Q6NUK4 255 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 PPP4R4Q6NUP7 873 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 ZNF550Q7Z398 422 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 DHDDSQ86SQ9 333 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 REXO5Q96IC2 774 aaKnown RBP15.13■□□□□ 0.01
RER1-202ENST00000378512 SLC39A3Q9BRY0 314 aa15.13■□□□□ 0.01
RER1-202ENST00000378512 TACO1Q9BSH4 297 aaKnown RBP15.13■□□□□ 0.01
RER1-202ENST00000378512 IGKV3D-15A0A087WSY6 115 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 TMED7-TICAM2A0A0A6YYA0 188 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 SULT2B1O00204 365 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 ANGPT2O15123 496 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 YES1P07947 543 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 GKN3PP0CG01 181 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 PRG2P13727 222 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 CD99P14209 185 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 POU2F1P14859 743 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 UQCRBP14927 111 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 KLK2P20151 261 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 TACR3P29371 465 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 ADSLP30566 484 aaPredicted RBP15.12■□□□□ 0.01
RER1-202ENST00000378512 PRKAR1BP31321 381 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 PDK3Q15120 406 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 COQ5Q5HYK3 327 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 ZNF311Q5JNZ3 666 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 WBP2NLQ6ICG8 309 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 PAMR1Q6UXH9 720 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 BEND4Q6ZU67 534 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 NET1Q7Z628 596 aaPredicted RBP15.12■□□□□ 0.01
RER1-202ENST00000378512 MTDHQ86UE4 582 aaKnown RBP15.12■□□□□ 0.01
RER1-202ENST00000378512 PTOV1Q86YD1 416 aa15.12■□□□□ 0.01
RER1-202ENST00000378512 TGIF2LYQ8IUE0 185 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms