RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 H0YC42 278 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 TNFSF11O14788 317 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 RCBTB2O95199 551 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 GGT1P19440 569 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 CXCR1P25024 350 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 CHRNB4P30926 498 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 TPD52P55327 224 aaPredicted RBP11.89□□□□□ -0.51
CKAP2-202ENST00000378034 SELENOWP63302 87 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 FXNQ16595 210 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 LRRC23Q53EV4 343 aaPredicted RBP11.89□□□□□ -0.51
CKAP2-202ENST00000378034 EEF1A1P5Q5VTE0 462 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 OR2A2Q6IF42 318 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 POMZP3Q6PJE2 187 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 RBM15BQ8NDT2 890 aaKnown RBP11.89□□□□□ -0.51
CKAP2-202ENST00000378034 ATP6V1C2Q8NEY4 427 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 OR10Q1Q8NGQ4 319 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 OSTF1Q92882 214 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 CPNE4Q96A23 557 aaPredicted RBP11.89□□□□□ -0.51
CKAP2-202ENST00000378034 C3orf49Q96BT1 292 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 DDIT4LQ96D03 193 aa11.89□□□□□ -0.51
CKAP2-202ENST00000378034 GMPR2Q9P2T1 348 aaKnown RBP11.89□□□□□ -0.51
CKAP2-202ENST00000378034 MCTS1Q9ULC4 181 aaKnown RBP11.89□□□□□ -0.51
CKAP2-202ENST00000378034 TOXO94900 526 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 SYNGR4O95473 234 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 OPN1LWP04000 364 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 PNMTP11086 282 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 SHC1P29353 583 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 RAC3P60763 192 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 CSNK2A1P68400 391 aaPredicted RBP11.88□□□□□ -0.51
CKAP2-202ENST00000378034 HOXC5Q00444 222 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
CKAP2-202ENST00000378034 ULK3Q6PHR2 472 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 C6orf89Q6UWU4 347 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 NCCRP1Q6ZVX7 275 aaPredicted RBP11.88□□□□□ -0.51
CKAP2-202ENST00000378034 P4HA3Q7Z4N8 544 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 POTEKPQ9BYX7 375 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 PCDHAC1Q9H158 963 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 SELENONQ9NZV5 590 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 RNF6Q9Y252 685 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 A0A0G2JNJ9 132 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 KDM4EB2RXH2 506 aaPredicted RBP11.88□□□□□ -0.51
CKAP2-202ENST00000378034 M0R3H8 397 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 DNPH1O43598 174 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 CXCL13O43927 109 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 UBOX5O94941 541 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 CRHP06850 196 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 HTR2AP28223 471 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 CBX1P83916 185 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 PON3Q15166 354 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 OR1Q1Q15612 314 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 GLYATQ6IB77 296 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 ZNF613Q6PF04 617 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 TMPPEQ6ZT21 453 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 CBLL1Q75N03 491 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 ATG4DQ86TL0 474 aaPredicted RBP11.88□□□□□ -0.51
CKAP2-202ENST00000378034 C9orf106Q8NAJ2 232 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 OR6T1Q8NGN1 323 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 FAM162AQ96A26 154 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 SDCCAG3Q96C92 435 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 ZNF845Q96IR2 970 aaPredicted RBP11.88□□□□□ -0.51
CKAP2-202ENST00000378034 OR5B2Q96R09 309 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 MCHR1Q99705 422 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 POLR2J2Q9GZM3 115 aaKnown RBP11.88□□□□□ -0.51
CKAP2-202ENST00000378034 POLR2J3Q9H1A7 115 aaKnown RBP11.88□□□□□ -0.51
CKAP2-202ENST00000378034 COQ10BQ9H8M1 238 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 GORASP2Q9H8Y8 452 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 ZNF629Q9UEG4 869 aaPredicted RBP11.88□□□□□ -0.51
CKAP2-202ENST00000378034 Q9UFV3 132 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 MAGEL2Q9UJ55 1249 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 RPS6KA6Q9UK32 745 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 PRPF19Q9UMS4 504 aaKnown RBP11.88□□□□□ -0.51
CKAP2-202ENST00000378034 TRAPPC4Q9Y296 219 aa11.88□□□□□ -0.51
CKAP2-202ENST00000378034 USP9XQ93008 2570 aaPredicted RBP11.88□□□□□ -0.51
CKAP2-202ENST00000378034 DIDO1Q9BTC0 2240 aaKnown RBP11.87□□□□□ -0.51
CKAP2-202ENST00000378034 A0A1B0GWA3 101 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 TMEM72A0PK05 275 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 A8MVM7 634 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 TMEM229AB2RXF0 380 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 TPST2O60704 377 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 PMS2P2O95744 297 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 TGM6O95932 706 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 IL18BPO95998 194 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 TFPIP10646 304 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 CTSSP25774 331 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 GTF2IRD2BQ6EKJ0 949 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 C5orf46Q6UWT4 87 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 RINLQ6ZS11 566 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 GTF2IRD2Q86UP8 949 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 CARM1Q86X55 608 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 RNF148Q8N7C7 305 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 LILRB4Q8NHJ6 448 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 STK35Q8TDR2 534 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 SLC47A1Q96FL8 570 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 WFDC6Q9BQY6 131 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 PRRG4Q9BZD6 226 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 RNF122Q9H9V4 155 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 GLRX2Q9NS18 164 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 TAS2R1Q9NYW7 299 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 SH3GLB1Q9Y371 365 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 A0A0B4J2E0 115 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms