RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 METTL21EPA6NDL7 271 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 SLC16A7O60669 478 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 CRABP1P29762 137 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 MLC1Q15049 377 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 SEC23BQ15437 767 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 KLHL26Q53HC5 615 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 BABAM2Q9NXR7 383 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 DHDHQ9UQ10 334 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 GPR139Q6DWJ6 353 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 UCN3Q969E3 161 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 C4orf36Q96KX1 117 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 GABARAPL1Q9H0R8 117 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 PHYHO14832 338 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 ITGA5P08648 1049 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 PPP5CP53041 499 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 SLC35A2P78381 396 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 GLO1Q04760 184 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 MLLT11Q13015 90 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-202ENST00000377797 SMAD2Q15796 467 aaKnown RBP13.41□□□□□ -0.26
TCOF1-202ENST00000377797 YOD1Q5VVQ6 348 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-202ENST00000377797 GLT8D1Q68CQ7 371 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 MARCH3Q86UD3 253 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 CMIPQ8IY22 773 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 MRPS2Q9Y399 296 aaKnown RBP13.41□□□□□ -0.26
TCOF1-202ENST00000377797 A0A1W2PQ72 361 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 RAB3BP20337 219 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 PSMB10P40306 273 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 HLA-BQ31612 363 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 GXYLT1Q4G148 440 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 C15orf40Q8WUR7 153 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 OR5M11Q96RB7 305 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 FAM60AQ9NP50 221 aa13.41□□□□□ -0.26
TCOF1-202ENST00000377797 A0A1W2PQL4 384 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-202ENST00000377797 FAM172BPA6NC97 362 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 NUDT21O43809 227 aaKnown RBP13.4□□□□□ -0.26
TCOF1-202ENST00000377797 FOXK2Q01167 660 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 C17orf67Q0P5P2 114 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 SACM1LQ9NTJ5 587 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 PCDHGB6Q9Y5F9 930 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 IGHV5-51A0A0C4DH38 117 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 A0A1W2PPV9 198 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 FAM25EA8MYX2 175 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 SLC19A2O60779 497 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 PER3P56645 1201 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 PCBP4P57723 403 aaKnown RBP13.4□□□□□ -0.26
TCOF1-202ENST00000377797 HSF2Q03933 536 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 NLGN4YQ8NFZ3 816 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-202ENST00000377797 S1PR5Q9H228 398 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 LRRN3Q9H3W5 708 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 GPN2Q9H9Y4 310 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-202ENST00000377797 A6NL46 340 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 SOCS6O14544 535 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 ARHGAP33O14559 1287 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 PPICP45877 212 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 GPR3P46089 330 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 NXPH1P58417 271 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 POU3F1Q03052 451 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-202ENST00000377797 AGERQ15109 404 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 PRAMEF17Q5VTA0 474 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 QSOX2Q6ZRP7 698 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 OR4C15Q8NGM1 316 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 PFN4Q8NHR9 129 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 C7orf34Q96L11 122 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 FOXN4Q96NZ1 517 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 INTS14Q96SY0 518 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 NUDT22Q9BRQ3 303 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 SP140LQ9H930 580 aa13.4□□□□□ -0.26
TCOF1-202ENST00000377797 COLQQ9Y215 455 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-202ENST00000377797 C2orf72A6NCS6 295 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 A6NIZ1 184 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 CENPBD1B2RD01 187 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 SUSD5O60279 629 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 SLC1A3P43003 542 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 DAP3P51398 398 aaKnown RBP13.4□□□□□ -0.27
TCOF1-202ENST00000377797 RAP1BP61224 184 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 RAP1AP62834 184 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 SRYQ05066 204 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 TMEM71Q6P5X7 295 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 ZNF517Q6ZMY9 492 aaPredicted RBP13.4□□□□□ -0.27
TCOF1-202ENST00000377797 LRRC56Q8IYG6 542 aaPredicted RBP13.4□□□□□ -0.27
TCOF1-202ENST00000377797 Q8N402 240 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 BCORP1Q8N888 145 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 CHST8Q9H2A9 424 aa13.4□□□□□ -0.27
TCOF1-202ENST00000377797 TMEM265A0A087WTH1 108 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 NPIPB8E9PQR5 432 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 CAPNS1P04632 268 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 IDUAP35475 653 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 MAGEA2P43356 314 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 EPHA4P54764 986 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 NXNL2Q5VZ03 156 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 FCRL6Q6DN72 434 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 ACSM5Q6NUN0 579 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 PJA1Q8NG27 643 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 OR5AK2Q8NH90 309 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 DSCR3O14972 297 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 NOS1APO75052 506 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-202ENST00000377797 MAS1P04201 325 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 CSN2P05814 226 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 TCN2P20062 427 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 FAHD1Q6P587 224 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms