RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 RNF220Q5VTB9 566 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 PRAMEF8Q5VWM4 474 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 PRAMEF7Q5VXH5 474 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 TFAP2EQ6VUC0 442 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 SPNS3Q6ZMD2 512 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 ZNF836Q6ZNA1 936 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 DDIT4LQ96D03 193 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 PSD2Q9BQI7 771 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 OR10A4Q9H209 315 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 A4GALTQ9NPC4 353 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 PRDM4Q9UKN5 801 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 ZNF232Q9UNY5 417 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 CORO2BQ9UQ03 480 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 PLEKHA6Q9Y2H5 1048 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 F8P00451 2351 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 FREM1Q5H8C1 2179 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 TMED7-TICAM2A0A0A6YYA0 188 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 C5orf58C9J3I9 102 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 DNPH1O43598 174 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 EDF1O60869 148 aaKnown RBP14.97□□□□□ -0.01
HMGN4-201ENST00000377575 RAF1P04049 648 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 BMP2P12643 396 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 SLC1A3P43003 542 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 MAP2K6P52564 334 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 RPS26P11Q5JNZ5 115 aaPredicted RBP14.97□□□□□ -0.01
HMGN4-201ENST00000377575 ABLIM2Q6H8Q1 611 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 STAC2Q6ZMT1 411 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 VRK2Q86Y07 508 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 BBS10Q8TAM1 723 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 ZC3HAV1LQ96H79 300 aaKnown RBP14.97□□□□□ -0.01
HMGN4-201ENST00000377575 FOXC2Q99958 501 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 LIME1Q9H400 295 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 PLEKHF2Q9H8W4 249 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 NPHS2Q9NP85 383 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 CCM2LQ9NUG4 571 aaPredicted RBP14.97□□□□□ -0.01
HMGN4-201ENST00000377575 EMC3Q9P0I2 261 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 C6orf203Q9P0P8 240 aaPredicted RBP14.97□□□□□ -0.01
HMGN4-201ENST00000377575 GPR52Q9Y2T5 361 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 IFT52Q9Y366 437 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 TMED7Q9Y3B3 224 aa14.97□□□□□ -0.01
HMGN4-201ENST00000377575 ZNF724A8MTY0 619 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 DEFB108AA8MXU0 73 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 ZNF208O43345 1280 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 NCF2P19878 526 aaPredicted RBP14.96□□□□□ -0.01
HMGN4-201ENST00000377575 PSMB1P20618 241 aaKnown RBP14.96□□□□□ -0.01
HMGN4-201ENST00000377575 TACR3P29371 465 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 COPZ1P61923 177 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 KEAP1Q14145 624 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 GCNT6Q5T4J0 391 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 NUFIP2Q7Z417 695 aaKnown RBP14.96□□□□□ -0.01
HMGN4-201ENST00000377575 MTDHQ86UE4 582 aaKnown RBP14.96□□□□□ -0.01
HMGN4-201ENST00000377575 ADGRG3Q86Y34 549 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 PIGXQ8TBF5 258 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 PIK3IP1Q96FE7 263 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 THOC1Q96FV9 657 aaKnown RBP14.96□□□□□ -0.01
HMGN4-201ENST00000377575 SPATA9Q9BWV2 254 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 HDHD5Q9BXW7 423 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 ACTR6Q9GZN1 396 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 BCL2L10Q9HD36 194 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 RLIMQ9NVW2 624 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 SLC25A37Q9NYZ2 338 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 DCTN4Q9UJW0 460 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 OSGIN1Q9UJX0 560 aa14.96□□□□□ -0.01
HMGN4-201ENST00000377575 A0A0G2JND7 137 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 A0A1W2PP18 115 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 NUDT7P0C024 238 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 GKN3PP0CG01 181 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 CCNA2P20248 432 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 PDK3Q15120 406 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 PAGE3Q5JUK9 113 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 ANKRD34AQ69YU3 496 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 WBP2NLQ6ICG8 309 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 CXorf67Q86X51 503 aaPredicted RBP14.95□□□□□ -0.02
HMGN4-201ENST00000377575 MSRB3Q8IXL7 192 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 STEAP2Q8NFT2 490 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 MAL2Q969L2 176 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 MBD6Q96DN6 1003 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 ARL5BQ96KC2 179 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 ALPK1Q96QP1 1244 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 ZNF300Q96RE9 604 aaPredicted RBP14.95□□□□□ -0.02
HMGN4-201ENST00000377575 OR11A1Q9GZK7 315 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 SLC52A3Q9NQ40 469 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 VAPAQ9P0L0 249 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 TMEM181Q9P2C4 612 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.95□□□□□ -0.02
HMGN4-201ENST00000377575 LEF1Q9UJU2 399 aaPredicted RBP14.95□□□□□ -0.02
HMGN4-201ENST00000377575 ING1Q9UK53 422 aaPredicted RBP14.95□□□□□ -0.02
HMGN4-201ENST00000377575 TRAPPC4Q9Y296 219 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 GMEB1Q9Y692 573 aa14.95□□□□□ -0.02
HMGN4-201ENST00000377575 TMEM72A0PK05 275 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 EVPLLA8MZ36 301 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 SIAH2O43255 324 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 GCM2O75603 506 aaPredicted RBP14.94□□□□□ -0.02
HMGN4-201ENST00000377575 ATE1O95260 518 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 ARAFP10398 606 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 ETS2P15036 469 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 IL32P24001 234 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 CXCR1P25024 350 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 OR3A2P47893 321 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 OR2B6P58173 313 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms