RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 ISXQ2M1V0 245 aa11.49□□□□□ -0.57
CLCN6-206ENST00000376496 DCAF12Q5T6F0 453 aa11.49□□□□□ -0.57
CLCN6-206ENST00000376496 UBE2UQ5VVX9 321 aa11.49□□□□□ -0.57
CLCN6-206ENST00000376496 BPHLQ86WA6 291 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-206ENST00000376496 SGTBQ96EQ0 304 aa11.49□□□□□ -0.57
CLCN6-206ENST00000376496 DOK1Q99704 481 aa11.49□□□□□ -0.57
CLCN6-206ENST00000376496 RNF167Q9H6Y7 350 aa11.49□□□□□ -0.57
CLCN6-206ENST00000376496 ENPP5Q9UJA9 477 aa11.49□□□□□ -0.57
CLCN6-206ENST00000376496 HS3ST3B1Q9Y662 390 aa11.49□□□□□ -0.57
CLCN6-206ENST00000376496 PNMA8CA0A1B0GUJ8 204 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 SHISA8B8ZZ34 492 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 LRRTM2O43300 516 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 NOL3O60936 208 aaKnown RBP11.48□□□□□ -0.57
CLCN6-206ENST00000376496 PPM1BO75688 479 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 ETV1P50549 477 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 CDH11P55287 796 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 FOXK2Q01167 660 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 OR10G3Q8NGC4 313 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 MOSPD2Q8NHP6 518 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 NDNFQ8TB73 568 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 DNAJA4Q8WW22 397 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-206ENST00000376496 TMEM80Q96HE8 168 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 LAT2Q9GZY6 243 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 CNOT2Q9NZN8 540 aaKnown RBP11.48□□□□□ -0.57
CLCN6-206ENST00000376496 FOXJ2Q9P0K8 574 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 SEC14L4Q9UDX3 406 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 TMEM5Q9Y2B1 443 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 EML6Q6ZMW3 1958 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 BLOC1S5-TXNDC5H3BN57 136 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 JMJD7P0C870 316 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 SOX3P41225 446 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 RBM34P42696 430 aaKnown RBP11.48□□□□□ -0.57
CLCN6-206ENST00000376496 SLC16A1P53985 500 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 GAS1P54826 345 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 LTBQ06643 244 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 KLHL12Q53G59 568 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 ARMCX4Q5H9R4 360 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 C3orf38Q5JPI3 329 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 OR2G6Q5TZ20 316 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 AADACL4Q5VUY2 407 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 CXXC5Q7LFL8 322 aaKnown RBP11.48□□□□□ -0.57
CLCN6-206ENST00000376496 SLC46A3Q7Z3Q1 461 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 ZNF420Q8TAQ5 688 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-206ENST00000376496 DEFB126Q9BYW3 111 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 OR51V1Q9H2C8 321 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 FN3KQ9H479 309 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 KLHL1Q9NR64 748 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 TOR4AQ9NXH8 423 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 MED11Q9P086 117 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 MYOTQ9UBF9 498 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 EXPH5Q8NEV8 1989 aa11.48□□□□□ -0.57
CLCN6-206ENST00000376496 OR6C70A6NIJ9 312 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 PRODHO43272 600 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 HCN1O60741 890 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 RCBTB2O95199 551 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 TCN2P20062 427 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 GADD45AP24522 165 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 OTX2P32243 289 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 RPS5P46782 204 aaKnown RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 TMBIM6P55061 237 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 NFATC3Q12968 1075 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 TSTQ16762 297 aaKnown RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 COL28A1Q2UY09 1125 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 ZNF362Q5T0B9 420 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 LHFPL3Q86UP9 236 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 P2RY8Q86VZ1 359 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 ERI1Q8IV48 349 aaKnown RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 ZNF440Q8IYI8 595 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 OR51L1Q8NGJ5 315 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 OR9Q1Q8NGQ5 310 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 OR4K13Q8NH42 304 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 ERMAPQ96PL5 475 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 WDR54Q9H977 334 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 AKAP7Q9P0M2 348 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 C19orf25Q9UFG5 118 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 OSGIN1Q9UJX0 560 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 CNOT1A5YKK6 2376 aaKnown RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 KDM4EB2RXH2 506 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 C9orf172C9J069 976 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 ZFAND5O76080 213 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 RPL4P36578 427 aaKnown RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 MTNR1AP48039 350 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 RPS3AP61247 264 aaKnown RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 CRMP1Q14194 572 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 QPRTQ15274 297 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 CLDN22Q8N7P3 220 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 SDR9C7Q8NEX9 313 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 RAB2BQ8WUD1 216 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 TP53INP1Q96A56 240 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 TBX5Q99593 518 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 CDCA4Q9BXL8 241 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 OR11A1Q9GZK7 315 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 ZNF160Q9HCG1 818 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 PPIEQ9UNP9 301 aaKnown RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 VDAC3Q9Y277 283 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 IER3IP1Q9Y5U9 82 aa11.47□□□□□ -0.57
CLCN6-206ENST00000376496 RIF1Q5UIP0 2472 aaKnown RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 ZFHX2Q9C0A1 2572 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-206ENST00000376496 IGHV1-45A0A0A0MS14 117 aa11.46□□□□□ -0.57
CLCN6-206ENST00000376496 B4E171 279 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms