RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 TRBV5-3A0A0A0MS03 114 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 TMEM72A0PK05 275 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 CYTIPO60759 359 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 PGM3O95394 542 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 HRGP04196 525 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 PRG2P13727 222 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 SLC1A3P43003 542 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 HTR3AP46098 478 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 IST1P53990 364 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 RASGEF1BQ0VAM2 473 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 FADDQ13158 208 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 LARS2Q15031 903 aaKnown RBP12.69□□□□□ -0.38
CLCN6-203ENST00000376490 LIN52Q52LA3 116 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 ZNF311Q5JNZ3 666 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 DLEU7Q6UYE1 221 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 STAC2Q6ZMT1 411 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 BEND4Q6ZU67 534 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 STK32CQ86UX6 486 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 PSD2Q9BQI7 771 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 MED18Q9BUE0 208 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 SPATA9Q9BWV2 254 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 TMEM120AQ9BXJ8 343 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 RSPO3Q9BXY4 272 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-203ENST00000376490 ADAM19Q9H013 955 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 IKZF5Q9H5V7 419 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 GP6Q9HCN6 339 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 BCL2L10Q9HD36 194 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 C6orf203Q9P0P8 240 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-203ENST00000376490 TRIM33Q9UPN9 1127 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 SPIN1Q9Y657 262 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-203ENST00000376490 DSCAMO60469 2012 aa12.69□□□□□ -0.38
CLCN6-203ENST00000376490 A0A1W2PPR1 153 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 C5orf58C9J3I9 102 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 FAAHO00519 579 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 SIAH2O43255 324 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 FESP07332 822 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 THBS1P07996 1170 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 GPX2P18283 190 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 PPIBP23284 216 aaKnown RBP12.68□□□□□ -0.38
CLCN6-203ENST00000376490 FKBP2P26885 142 aaKnown RBP12.68□□□□□ -0.38
CLCN6-203ENST00000376490 CLK1P49759 484 aaKnown RBP12.68□□□□□ -0.38
CLCN6-203ENST00000376490 POLR2HP52434 150 aaKnown RBP12.68□□□□□ -0.38
CLCN6-203ENST00000376490 CSNK2A1P68400 391 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-203ENST00000376490 TESK1Q15569 626 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 RUNDC3AQ59EK9 446 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 RNF220Q5VTB9 566 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 PRAMEF8Q5VWM4 474 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 PRAMEF7Q5VXH5 474 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 TFAP2EQ6VUC0 442 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 MTDHQ86UE4 582 aaKnown RBP12.68□□□□□ -0.38
CLCN6-203ENST00000376490 RETREG3Q86VR2 466 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 ZNF440Q8IYI8 595 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 NFKBIDQ8NI38 313 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 ZNF300Q96RE9 604 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-203ENST00000376490 SIKE1Q9BRV8 207 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 PLEKHF2Q9H8W4 249 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 BCO1Q9HAY6 547 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 CCM2LQ9NUG4 571 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-203ENST00000376490 FGFR1OP2Q9NVK5 253 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 KLHL9Q9P2J3 617 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-203ENST00000376490 ST6GALNAC2Q9UJ37 374 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 LEF1Q9UJU2 399 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-203ENST00000376490 IFT52Q9Y366 437 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 NDUFAF1Q9Y375 327 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 HDGFL3Q9Y3E1 203 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 GMEB1Q9Y692 573 aa12.68□□□□□ -0.38
CLCN6-203ENST00000376490 PRRC2AP48634 2157 aaKnown RBP12.68□□□□□ -0.38
CLCN6-203ENST00000376490 ZC3H12DA2A288 527 aaKnown RBP12.67□□□□□ -0.38
CLCN6-203ENST00000376490 EVPLLA8MZ36 301 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 PMS2P2O95744 297 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 THBDP07204 575 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 ARAFP10398 606 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 IMPDH2P12268 514 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 CRYGSP22914 178 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 OR2B6P58173 313 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 CDK6Q00534 326 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 GUCY1A3Q02108 690 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 TSC22D1Q15714 1073 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 GCNT6Q5T4J0 391 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 METTL21CQ5VZV1 264 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 CGB2Q6NT52 195 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 REEP3Q6NUK4 255 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 SERPINA11Q86U17 422 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 CXorf67Q86X51 503 aaPredicted RBP12.67□□□□□ -0.38
CLCN6-203ENST00000376490 CCDC103Q8IW40 242 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 CADM2Q8N3J6 435 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 BBS10Q8TAM1 723 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 DDIT4LQ96D03 193 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 ZNF226Q9NYT6 803 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 TMEM181Q9P2C4 612 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 TRAPPC4Q9Y296 219 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 PLEKHA6Q9Y2H5 1048 aa12.67□□□□□ -0.38
CLCN6-203ENST00000376490 DEFB108AA8MXU0 73 aa12.66□□□□□ -0.38
CLCN6-203ENST00000376490 ZNF814B7Z6K7 855 aa12.66□□□□□ -0.38
CLCN6-203ENST00000376490 ANGPT2O15123 496 aa12.66□□□□□ -0.38
CLCN6-203ENST00000376490 ZNF208O43345 1280 aa12.66□□□□□ -0.38
CLCN6-203ENST00000376490 FRS3O43559 492 aa12.66□□□□□ -0.38
CLCN6-203ENST00000376490 RAMP1O60894 148 aa12.66□□□□□ -0.38
CLCN6-203ENST00000376490 GCM2O75603 506 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms