RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PTTG3PQ9NZH4 202 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 USP36Q9P275 1121 aaKnown RBP13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 STON1Q9Y6Q2 735 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 TRAPPC13A5PLN9 417 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 FAM86C2PA6NEL3 165 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 SLC22A31A6NKX4 558 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 PPP1R3DO95685 299 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 RRASP10301 218 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 BLVRAP53004 296 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 EEF1A1P68104 462 aaKnown RBP13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 IKZF1Q13422 519 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 ELAVL3Q14576 367 aaKnown RBP13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 TCEA2Q15560 299 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 GPALPP1Q8IXQ4 340 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 OR56B4Q8NH76 319 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 DERL3Q96Q80 235 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 COPZ2Q9P299 210 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 ST6GALNAC2Q9UJ37 374 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 NPFFR2Q9Y5X5 522 aa13.04□□□□□ -0.32
CLCNKA-202ENST00000375692 PEX12O00623 359 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 KAT7O95251 611 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 VEGFCP49767 419 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 RAB14P61106 215 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 PITPNAQ00169 270 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 ID2Q02363 134 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 Q7L0L9 218 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 ASPGQ86U10 573 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 SERPINA12Q8IW75 414 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 RAB42Q8N4Z0 105 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 OR11G2Q8NGC1 345 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 OR52E1Q8NGJ3 308 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 ZNF671Q8TAW3 534 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 LGALS14Q8TCE9 139 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 BPIFA2Q96DR5 249 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 WDR89Q96FK6 387 aaPredicted RBP13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 SDF2Q99470 211 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 KRCC1Q9NPI7 259 aaPredicted RBP13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 RDH8Q9NYR8 311 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 KCNE5Q9UJ90 142 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 CAMK2AQ9UQM7 478 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 RCE1Q9Y256 329 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 EDDM13A0A1B0GTR0 161 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 M0R233 179 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 FLRT2O43155 660 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 PCDH8O95206 1070 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 UGT2B7P16662 529 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 CD53P19397 219 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 NDUFS1P28331 727 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 LCN1P31025 176 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 PTGS2P35354 604 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 ARFIP1P53367 373 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 TSPAN5P62079 268 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 SIM1P81133 766 aaPredicted RBP13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 TRAM1Q15629 374 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 MRPL2Q5T653 305 aaKnown RBP13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 LINGO2Q7L985 606 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 CMTM4Q8IZR5 234 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 OR2L3Q8NG85 312 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 ZMYND19Q96E35 227 aaPredicted RBP13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 OR14A2Q96R54 314 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 WSB2Q9NYS7 404 aaPredicted RBP13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 RPS6KB2Q9UBS0 482 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 SIGLEC7Q9Y286 467 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 RNF215Q9Y6U7 377 aa13.03□□□□□ -0.32
CLCNKA-202ENST00000375692 A0A1W2PPL8 197 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 DUXAA6NLW8 204 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 LYPD3O95274 346 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 PEBP1P30086 187 aaKnown RBP13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 MAGEB1P43366 347 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 TRMT12Q53H54 448 aaKnown RBP13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 BMP8AQ7Z5Y6 402 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 FGD2Q7Z6J4 655 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 SLC51BQ86UW2 128 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 RANBP3LQ86VV4 465 aaPredicted RBP13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 NRROSQ86YC3 692 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 OR2T4Q8NH00 348 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 GRHL3Q8TE85 626 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 SEC22CQ9BRL7 303 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 GSX2Q9BZM3 304 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 CACYBPQ9HB71 228 aaKnown RBP13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 MEPEQ9NQ76 525 aaPredicted RBP13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 INPP5EQ9NRR6 644 aa13.02□□□□□ -0.32
CLCNKA-202ENST00000375692 RIIAD1A6NNX1 92 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 PEX14O75381 377 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 RGS11O94810 467 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 RCBTB2O95199 551 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 ALDOBP05062 364 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 PTHLHP12272 177 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 SLC2A5P22732 501 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 GDI2P50395 445 aaKnown RBP13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 SEC13P55735 322 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 TAS2R43P59537 309 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 TAGLNQ01995 201 aaKnown RBP13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 HTR4Q13639 388 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 CEBPEQ15744 281 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 ITPRIPL2Q3MIP1 535 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 TCTE1Q5JU00 501 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 HES5Q5TA89 166 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 SLC22A10Q63ZE4 541 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 FAAP20Q6NZ36 180 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms