RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 FN3KQ9H479 309 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 POMT2Q9UKY4 750 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 PIAS3Q9Y6X2 628 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 CENPVL1A0A0U1RR11 272 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 POM121CA8CG34 1229 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 L7N2F9 121 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 BHLHE40O14503 412 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ARPC1BO15143 372 aaKnown RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 MID1O15344 667 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 LATO43561 262 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 HYAL3O43820 417 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 PCCBP05166 539 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ADRB1P08588 477 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 HOXD4P09016 255 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 FOSL2P15408 326 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 FOXK2Q01167 660 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ZNF85Q03923 595 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 TMEM52BQ4KMG9 183 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 TMEM81Q6P7N7 255 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ARSKQ6UWY0 536 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 C3P1Q6ZMU1 363 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ZNF836Q6ZNA1 936 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 SSX6Q7RTT6 188 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 LHFPL5Q8TAF8 219 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 BRIX1Q8TDN6 353 aaKnown RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 DOK4Q8TEW6 326 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ACTRT3Q9BYD9 372 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 SDHAF2Q9NX18 166 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ABRACLQ9P1F3 81 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 CAMK2AQ9UQM7 478 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ZNF780BQ9Y6R6 833 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 TNRC18O15417 2968 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 TEX46H3BTG2 121 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 KHNYNO15037 678 aaKnown RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 GATBO75879 557 aaKnown RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ADH1BP00325 375 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 NAGAP17050 411 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ATP5A1P25705 553 aaKnown RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 HSD17B2P37059 387 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 GBX2P52951 348 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 MRPS21P82921 87 aaKnown RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 CRMP1Q14194 572 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 SLC48A1Q6P1K1 146 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 FAM111BQ6SJ93 734 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 WDR88Q6ZMY6 472 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 FRRS1Q6ZNA5 592 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ERN2Q76MJ5 926 aaKnown RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 CACUL1Q86Y37 369 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 RFLNBQ8N5W9 214 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 MOSPD2Q8NHP6 518 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 SMIM4Q8WVI0 70 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 MS4A6EQ96DS6 147 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 PEX11GQ96HA9 241 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 MENTQ9BUN1 341 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ZNF69Q9UC07 566 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 RANBP2P49792 3224 aaKnown RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 SCN3AQ9NY46 2000 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 TRAV27A0A087WT01 109 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-203ENST00000374877 RIIAD1A6NNX1 92 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 F3P13726 295 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 ADRB3P13945 408 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 CD53P19397 219 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 NTSR1P30989 418 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 NUP62P37198 522 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-203ENST00000374877 NRG3P56975 720 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 PRDX1Q06830 199 aaKnown RBP10.24□□□□□ -0.77
CCDC40-203ENST00000374877 DYRK1AQ13627 763 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 TMEM35AQ53FP2 167 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 TMEM255AQ5JRV8 349 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 ABHD17CQ6PCB6 329 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 ZNF765Q7L2R6 523 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 SERPINA12Q8IW75 414 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 MEIOBQ8N635 442 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 OR11G2Q8NGC1 345 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 HAVCR2Q8TDQ0 301 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 ORAI1Q96D31 301 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 GUCD1Q96NT3 240 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 DERL3Q96Q80 235 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 ADGRL4Q9HBW9 690 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 INPP5EQ9NRR6 644 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 A0A0C4DFX4 3053 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 LRRK1Q38SD2 2015 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 NUPL2O15504 423 aaKnown RBP10.24□□□□□ -0.77
CCDC40-203ENST00000374877 KHDRBS3O75525 346 aaKnown RBP10.24□□□□□ -0.77
CCDC40-203ENST00000374877 SC5DO75845 299 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 IL9P15248 144 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 PSMB1P20618 241 aaKnown RBP10.24□□□□□ -0.77
CCDC40-203ENST00000374877 C4BPBP20851 252 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 DMKNQ6E0U4 476 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-203ENST00000374877 FAM122CQ6P4D5 195 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 RANBP3LQ86VV4 465 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-203ENST00000374877 LNX2Q8N448 690 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 RAB42Q8N4Z0 105 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 TOR1AIP2Q8NFQ8 470 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 COQ8AQ8NI60 647 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 TMEM239Q8WW34 195 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 OR14A2Q96R54 314 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 AIFM2Q9BRQ8 373 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 LGR4Q9BXB1 951 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms