RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 OR9A4Q8NGU2 314 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 ASB15Q8WXK1 588 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 CTHRC1Q96CG8 243 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 HS6ST2Q96MM7 605 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 ZNF578Q96N58 590 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 DDA1Q9BW61 102 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 POLE3Q9NRF9 147 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 ZNF223Q9UK11 482 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 SF3B6Q9Y3B4 125 aaKnown RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 TEX51A0A1B0GUA7 166 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 FAM183AA6NL82 134 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 AKAP8O43823 692 aaKnown RBP14.28□□□□□ -0.12
CCDC40-202ENST00000374876 KCNK2O95069 426 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 ZGLP1P0C6A0 271 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 MSL3P1P0C860 447 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 SPNP16150 400 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 MAKP20794 623 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 SDC2P34741 201 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 MAP3K8P41279 467 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 DESI1Q6ICB0 168 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 GID4Q8IVV7 300 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 ZFP41Q8N8Y5 198 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 WDFY2Q96P53 400 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 SECISBP2Q96T21 854 aaKnown RBP14.28□□□□□ -0.12
CCDC40-202ENST00000374876 MED18Q9BUE0 208 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 HINT3Q9NQE9 182 aaKnown RBP14.28□□□□□ -0.12
CCDC40-202ENST00000374876 C20orf141Q9NUB4 165 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 C14orf105Q9NVL8 296 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 WDR70Q9NW82 654 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 TNFRSF10DQ9UBN6 386 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 SERTAD3Q9UJW9 196 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 V9GYH0 126 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 SCN2AQ99250 2005 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 ZFHX4Q86UP3 3567 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 LAMA5O15230 3695 aa14.28□□□□□ -0.12
CCDC40-202ENST00000374876 SOCS6O14544 535 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 SNPHO15079 494 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 LRRTM2O43300 516 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 CBX7O95931 251 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 IGHA1P01876 353 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 CLEC2LP0C7M8 214 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 FUT1P19526 365 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 FABP5Q01469 135 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 PLBD1Q6P4A8 553 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 SMARCD3Q6STE5 483 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 CCBE1Q6UXH8 406 aaPredicted RBP14.27□□□□□ -0.12
CCDC40-202ENST00000374876 GDPD3Q7L5L3 318 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 ZNF614Q8N883 585 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 ZNF485Q8NCK3 441 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 GALNT6Q8NCL4 622 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 NACC2Q96BF6 587 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 ZNF559Q9BR84 538 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 RBCK1Q9BYM8 510 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 ULBP3Q9BZM4 244 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 CHRNA10Q9GZZ6 450 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 TMEM27Q9HBJ8 222 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 ATP13A2Q9NQ11 1180 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 PLCL2Q9UPR0 1127 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 IGF2RP11717 2491 aa14.27□□□□□ -0.12
CCDC40-202ENST00000374876 SDK2Q58EX2 2172 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 SLC35F4A4IF30 521 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 NKX2-2O95096 273 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 RCBTB2O95199 551 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 LYPD3O95274 346 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 PAICSP22234 425 aaKnown RBP14.27□□□□□ -0.13
CCDC40-202ENST00000374876 TGIF1Q15583 401 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 ZNHIT3Q15649 155 aaPredicted RBP14.27□□□□□ -0.13
CCDC40-202ENST00000374876 ZNF791Q3KP31 576 aaPredicted RBP14.27□□□□□ -0.13
CCDC40-202ENST00000374876 RPL13AP3Q6NVV1 102 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 DGAT2L6Q6ZPD8 337 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 OR52N1Q8NH53 320 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 AP3S1Q92572 193 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 TMCO6Q96DC7 493 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 BPIFA2Q96DR5 249 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 ABCB9Q9NP78 766 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 SACM1LQ9NTJ5 587 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 PLEKHB1Q9UF11 243 aaPredicted RBP14.27□□□□□ -0.13
CCDC40-202ENST00000374876 TMEM5Q9Y2B1 443 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 MED31Q9Y3C7 131 aa14.27□□□□□ -0.13
CCDC40-202ENST00000374876 TRDV1A0A1B0GX56 115 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 SCRG1O75711 98 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 OR2B3O76000 313 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 STK17BO94768 372 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 SOX30O94993 753 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 LALBAP00709 142 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 SAGP10523 405 aaPredicted RBP14.26□□□□□ -0.13
CCDC40-202ENST00000374876 IMPDH2P12268 514 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 FGF9P31371 208 aaPredicted RBP14.26□□□□□ -0.13
CCDC40-202ENST00000374876 SLC35F1Q5T1Q4 408 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 ZNF613Q6PF04 617 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 CD200R1LQ6Q8B3 271 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 TIPARPQ7Z3E1 657 aaKnown RBP14.26□□□□□ -0.13
CCDC40-202ENST00000374876 ZAR1Q86SH2 424 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 LSRQ86X29 649 aaPredicted RBP14.26□□□□□ -0.13
CCDC40-202ENST00000374876 SYT14Q8NB59 555 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 SLC38A9Q8NBW4 561 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 OR51G2Q8NGK0 314 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 GRHL3Q8TE85 626 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 CNTNAP3BQ96NU0 1288 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 ZPBPQ9BS86 351 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms