RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 ZNF223Q9UK11 482 aaPredicted RBP16.83■□□□□ 0.29
RXRB-202ENST00000374685 HMX3A6NHT5 357 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 DVL2O14641 736 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 HPGDP15428 266 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 C14orf28Q4W4Y0 310 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 ZCCHC12Q6PEW1 402 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 UFD1Q92890 307 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 CCDC59Q9P031 241 aaKnown RBP16.83■□□□□ 0.28
RXRB-202ENST00000374685 CLDN16Q9Y5I7 305 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 MPDZO75970 2070 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 TLCD2A6NGC4 264 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 CD8B2A6NJW9 211 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 LMO7DNF2Z398 122 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 LOC110117498-PIK3R3F6TDL0 507 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 PRAMEF2O60811 474 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 NCR1O76036 304 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 CD8BP10966 210 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 NAT2P11245 290 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 RUNX1T1Q06455 604 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 ZMAT1Q5H9K5 638 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 FAM205BPQ63HN1 556 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 C19orf48Q6RUI8 117 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 ZNF595Q8IYB9 648 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 TMEM99Q8N816 258 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 BCORP1Q8N888 145 aa16.83■□□□□ 0.28
RXRB-202ENST00000374685 CNTRLQ7Z7A1 2325 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 C2orf92A0A1B0GVN3 265 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 SSX4O60224 188 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 AK1P00568 194 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 C10orf53Q8N6V4 93 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 OR6C4Q8NGE1 309 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 SENP5Q96HI0 755 aaPredicted RBP16.82■□□□□ 0.28
RXRB-202ENST00000374685 SMURF1Q9HCE7 757 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 CUTCQ9NTM9 273 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 NUP50Q9UKX7 468 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 PCDHGB6Q9Y5F9 930 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 SOX1O00570 391 aaPredicted RBP16.82■□□□□ 0.28
RXRB-202ENST00000374685 MAGEB4O15481 346 aaPredicted RBP16.82■□□□□ 0.28
RXRB-202ENST00000374685 LYPD3O95274 346 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 HMGN1P05114 100 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 PTGS2P35354 604 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 GPR3P46089 330 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 LIMK1P53667 647 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 HCCSP53701 268 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 NXPH1P58417 271 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 FOXK2Q01167 660 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 FABP5Q01469 135 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 CRMP1Q14194 572 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 TBRG1Q3YBR2 411 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 TMEM151BQ8IW70 566 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 ZDHHC12Q96GR4 267 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 ZNF559Q9BR84 538 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 FN3KQ9H479 309 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 PEX16Q9Y5Y5 336 aa16.82■□□□□ 0.28
RXRB-202ENST00000374685 TBXA2RP21731 343 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 DRD5P21918 477 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 IL32P24001 234 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 TNFSF8P32971 234 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 ACAA2P42765 397 aaKnown RBP16.81■□□□□ 0.28
RXRB-202ENST00000374685 DAB2P98082 770 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 ESCO2Q56NI9 601 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 SLC25A30Q5SVS4 291 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 MED25Q71SY5 747 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 SDR9C7Q8NEX9 313 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 OR4K13Q8NH42 304 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 OR4C6Q8NH72 309 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 PHOSPHO1Q8TCT1 267 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 SIGLEC7Q9Y286 467 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 ADAM18Q9Y3Q7 739 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 PI4KAP42356 2102 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 A0A0B4J2E0 115 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 A0A1B0GX12 115 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 A8MV72 311 aaPredicted RBP16.81■□□□□ 0.28
RXRB-202ENST00000374685 PRR23D1E9PI22 279 aaPredicted RBP16.81■□□□□ 0.28
RXRB-202ENST00000374685 ZNF670-ZNF695F2Z2N8 137 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 SLC30A4O14863 429 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 PIAS2O75928 621 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 PRR23D2P0DMB1 279 aaPredicted RBP16.81■□□□□ 0.28
RXRB-202ENST00000374685 RORCP51449 518 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 MRGPREQ86SM8 312 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 SLC37A3Q8NCC5 494 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 MALT1Q9UDY8 824 aa16.81■□□□□ 0.28
RXRB-202ENST00000374685 EXOSC1Q9Y3B2 195 aaKnown RBP16.81■□□□□ 0.28
RXRB-202ENST00000374685 FAM86C2PA6NEL3 165 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 TRIM77I1YAP6 450 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 BHLHE40O14503 412 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 IMPA2O14732 288 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 CPEP16870 476 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 RPL4P36578 427 aaKnown RBP16.8■□□□□ 0.28
RXRB-202ENST00000374685 ETV6P41212 452 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 GRM7Q14831 915 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 EXOSC6Q5RKV6 272 aaKnown RBP16.8■□□□□ 0.28
RXRB-202ENST00000374685 SLC35F3Q8IY50 421 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 ERMAPQ96PL5 475 aaPredicted RBP16.8■□□□□ 0.28
RXRB-202ENST00000374685 FGF20Q9NP95 211 aaPredicted RBP16.8■□□□□ 0.28
RXRB-202ENST00000374685 PRDM9Q9NQV7 894 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 PRDM6Q9NQX0 595 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 LILRA5A6NI73 299 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 CASKO14936 926 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 RCBTB2O95199 551 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms