RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TEX261Q6UWH6 196 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 IL34Q6ZMJ4 242 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZNF547Q8IVP9 402 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 PHOSPHO1Q8TCT1 267 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 SAT2Q96F10 170 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 SYNPO2LQ9H987 977 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 CRLF2Q9HC73 371 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 RNF11Q9Y3C5 154 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 U3KQ87 197 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 SLC22A31A6NKX4 558 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 FAM155AB1AL88 458 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 BCAT2O15382 392 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 CCKARP32238 428 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 KCNC4Q03721 635 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 SPANXN4Q5MJ08 99 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 TSPEARQ8WU66 669 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 CMTM3Q96MX0 182 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 BET1LQ9NYM9 111 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR6C68A6NDL8 312 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 GAPDHSO14556 408 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 S100A7P31151 101 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 CLDN10P78369 228 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 UPRTQ96BW1 309 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 POPDC3Q9HBV1 291 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 SMOXQ9NWM0 555 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 GHRLQ9UBU3 117 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 K7ERU9 68 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 M0R143 59 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 ANKRD28O15084 1053 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 RHCEP18577 417 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 NTF3P20783 257 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 KIAA0895LQ68EN5 471 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 PLD6Q8N2A8 252 aaKnown RBP13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 INTS14Q96SY0 518 aa13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 PHF7Q9BWX1 381 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-202ENST00000372190 M0QZK8 103 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 ARHGAP33O14559 1287 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 PHYHO14832 338 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 GGCTO75223 188 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 THBS1P07996 1170 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 CBLP22681 906 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 GIFP27352 417 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 MRPL19P49406 292 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 CLDN2P57739 230 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 KIAA0319Q5VV43 1072 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 BRIX1Q8TDN6 353 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 CHAC2Q8WUX2 184 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 GIMAP1Q8WWP7 306 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 EXTL1Q92935 676 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZNF689Q96CS4 500 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 BABAM2Q9NXR7 383 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 POU2F3Q9UKI9 436 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 BLOC1S5-TXNDC5H3BN57 136 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 TERTO14746 1132 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 MSTNO14793 375 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 GBAP04062 536 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 GP1BBP13224 206 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 CD38P28907 300 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 MLLT10P55197 1068 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 ACTBL2Q562R1 376 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 BTNL8Q6UX41 500 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 CLRN3Q8NCR9 226 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR4K14Q8NGD5 310 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR8J3Q8NGG0 315 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR5D16Q8NGK9 328 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 SAP130Q9H0E3 1048 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 EMC7Q9NPA0 242 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZNF629Q9UEG4 869 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 PRODH2Q9UF12 536 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 GOLT1BQ9Y3E0 138 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 HEMK1Q9Y5R4 338 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 MAST2Q6P0Q8 1798 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 S100A11P31949 105 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 CEACAM20Q6UY09 585 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 NPAS3Q8IXF0 933 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 ACBD7Q8N6N7 88 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 CPNE4Q96A23 557 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 ACTL7AQ9Y615 435 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 PSAT1Q9Y617 370 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 ETV4P43268 484 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 TPPP2P59282 170 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 TCTE1Q5JU00 501 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 TSSK4Q6SA08 328 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 SYT13Q7L8C5 426 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 PCNPQ8WW12 178 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 REEP6Q96HR9 211 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 RANBP9Q96S59 729 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 UBTD1Q9HAC8 227 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 GIMAP2Q9UG22 337 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 PAPPA2Q9BXP8 1791 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 A0A1W2PQ09 198 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 AQP7O14520 342 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR2T1O43869 369 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 KCNK5O95279 499 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 PDLIM3Q53GG5 364 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 NANOGP8Q6NSW7 305 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 SLC35D2Q76EJ3 337 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 DPH7Q9BTV6 452 aa13.18□□□□□ -0.3
RAPGEF1-202ENST00000372190 NANOGQ9H9S0 305 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms