RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 GABRA5P31644 462 aa14.4□□□□□ -0.1
GTF3C4-201ENST00000372146 DAOAP59103 153 aa14.4□□□□□ -0.1
GTF3C4-201ENST00000372146 GPR85P60893 370 aa14.4□□□□□ -0.1
GTF3C4-201ENST00000372146 GHRLQ9UBU3 117 aa14.4□□□□□ -0.1
GTF3C4-201ENST00000372146 TRPM6Q9BX84 2022 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 ZNF860A6NHJ4 632 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 ELLP55199 621 aaPredicted RBP14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 SEC61A1P61619 476 aaKnown RBP14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 BRAT1Q6PJG6 821 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 CPOQ8IVL8 374 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 SUMF1Q8NBK3 374 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 UBAC2Q8NBM4 344 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 NTMT1Q9BV86 223 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 BTBD17A6NE02 478 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 H7BY64 318 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 TIA1P31483 386 aaKnown RBP eCLIP14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 OR52N2Q8NGI0 321 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 OR4A16Q8NH70 328 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 PPTC7Q8NI37 304 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 PRAP1Q96NZ9 151 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 FAM234AQ9H0X4 552 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 OR51I2Q9H344 312 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 PEX12O00623 359 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 NUDT21O43809 227 aaKnown RBP14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 SUSD5O60279 629 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 KLK3P07288 261 aaPredicted RBP14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 DBHP09172 617 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 LMO2P25791 158 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 TPPP2P59282 170 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 SLC35B4Q969S0 331 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 SYT17Q9BSW7 474 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 CABLES2Q9BTV7 478 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 ZDHHC7Q9NXF8 308 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 YTHDF2Q9Y5A9 579 aaKnown RBP14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 FEZF1A0PJY2 475 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 OR2J3O76001 311 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 SHMT2P34897 504 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 FAM182AQ5T1J6 154 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 FCRLAQ7L513 359 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 PPP1R3BQ86XI6 285 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 OR2G3Q8NGZ4 309 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 ESRP2Q9H6T0 727 aaKnown RBP14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 TMEM131LA2VDJ0 1609 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 ZNF724A8MTY0 619 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 EGFP01133 1207 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 LCATP04180 440 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 RAB40ALP0C0E4 278 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 UNGP13051 313 aaPredicted RBP14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 CLRN3Q8NCR9 226 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 RAB40AQ8WXH6 277 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 TECPR2O15040 1411 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 SULT1A3P0DMM9 295 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 SULT1A4P0DMN0 295 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 ESPNLQ6ZVH7 1005 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 FAM3CQ92520 227 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 INPP5KQ9BT40 448 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 TMEM59Q9BXS4 323 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 OR8U8P0C7N1 319 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 PLCXD2Q0VAA5 305 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 IRF4Q15306 451 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 SLC5A12Q1EHB4 618 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 TOR2AQ5JU69 321 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 MEX3DQ86XN8 651 aaKnown RBP14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 IGDCC3Q8IVU1 814 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 ADAMTS14Q8WXS8 1223 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 PIGQQ9BRB3 760 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 TMEM231Q9H6L2 316 aa14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 AKIRIN1Q9H9L7 192 aaPredicted RBP14.39□□□□□ -0.11
GTF3C4-201ENST00000372146 APEHP13798 732 aaKnown RBP14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 F2RL1P55085 397 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 ZXDBP98169 803 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 ZNF90Q03938 601 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 PAGE3Q5JUK9 113 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 CYB561A3Q8NBI2 242 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 TFAP2CQ92754 450 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 AGPAT4Q9NRZ5 378 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 ADAM29Q9UKF5 820 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 UNCXA6NJT0 531 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 MRPL19P49406 292 aaKnown RBP14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 RAB40BQ12829 278 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 MPPED2Q15777 294 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 GPR26Q8NDV2 337 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 CA5BP1Q8WTZ4 195 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 RBFOX1Q9NWB1 397 aaKnown RBP14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 KPTNQ9Y664 436 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 TOMM20LQ6UXN7 152 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 SEC22CQ9BRL7 303 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 CWH43Q9H720 699 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 PSAT1Q9Y617 370 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 YJEFN3A6XGL0 299 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 ASGR2P07307 311 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 PTAFRP25105 342 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 FPGSQ05932 587 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 OR5B3Q8NH48 314 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 M1APQ8TC57 530 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 SLC2A13Q96QE2 648 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 MMP3P08254 477 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 CHRNB4P30926 498 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 ZNF154Q13106 437 aa14.38□□□□□ -0.11
GTF3C4-201ENST00000372146 SNTB1Q13884 538 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms