RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CHURC1-FNTBB4DL54 471 aa26.58■■□□□ 1.84
SSBP3-204ENST00000371320 KRT8P05787 483 aa26.58■■□□□ 1.84
SSBP3-204ENST00000371320 HIST1H1CP16403 213 aaKnown RBP26.58■■□□□ 1.84
SSBP3-204ENST00000371320 FNTBP49356 437 aa26.58■■□□□ 1.84
SSBP3-204ENST00000371320 NKX2-5P52952 324 aaPredicted RBP26.58■■□□□ 1.84
SSBP3-204ENST00000371320 NR2C2APQ86WQ0 139 aa26.58■■□□□ 1.84
SSBP3-204ENST00000371320 SDR9C7Q8NEX9 313 aa26.58■■□□□ 1.84
SSBP3-204ENST00000371320 SLC2A4RGQ9NR83 387 aa26.58■■□□□ 1.84
SSBP3-204ENST00000371320 TMEM184BQ9Y519 407 aaPredicted RBP26.58■■□□□ 1.84
SSBP3-204ENST00000371320 IER3IP1Q9Y5U9 82 aa26.58■■□□□ 1.84
SSBP3-204ENST00000371320 TMEM131Q92545 1883 aa26.57■■□□□ 1.84
SSBP3-204ENST00000371320 SPTBP11277 2137 aa26.57■■□□□ 1.84
SSBP3-204ENST00000371320 A0A087WUJ7 227 aa26.57■■□□□ 1.84
SSBP3-204ENST00000371320 MEIOCA2RUB1 952 aa26.57■■□□□ 1.84
SSBP3-204ENST00000371320 SHC1P29353 583 aa26.57■■□□□ 1.84
SSBP3-204ENST00000371320 RPS5P46782 204 aaKnown RBP26.57■■□□□ 1.84
SSBP3-204ENST00000371320 GFERP55789 205 aa26.57■■□□□ 1.84
SSBP3-204ENST00000371320 ZNF800Q2TB10 664 aaPredicted RBP eCLIP26.57■■□□□ 1.84
SSBP3-204ENST00000371320 LRRC17Q8N6Y2 441 aa26.57■■□□□ 1.84
SSBP3-204ENST00000371320 PPIL3Q9H2H8 161 aaKnown RBP26.57■■□□□ 1.84
SSBP3-204ENST00000371320 LMAN1LQ9HAT1 526 aa26.57■■□□□ 1.84
SSBP3-204ENST00000371320 ZNF221Q9UK13 617 aa26.57■■□□□ 1.84
SSBP3-204ENST00000371320 IGHV5-51A0A0C4DH38 117 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 A8MU76 341 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 FAM25AB3EWG3 89 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 FAM25CB3EWG5 89 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 FAM25GB3EWG6 89 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 CD27P26842 260 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 CAPZA2P47755 286 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 GAS6Q14393 721 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 CPEB4Q17RY0 729 aaKnown RBP eCLIP26.56■■□□□ 1.84
SSBP3-204ENST00000371320 UBE2J2Q8N2K1 259 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 OR6F1Q8NGZ6 308 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 ABHD4Q8TB40 342 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 LRFN5Q96NI6 719 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 PDE7BQ9NP56 450 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 PRODH2Q9UF12 536 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 KLHL21Q9UJP4 597 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 ICAM5Q9UMF0 924 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 TTC36A6NLP5 189 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 MCIDASD6RGH6 385 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 PPM1BO75688 479 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 TCTE1Q5JU00 501 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 HBMQ6B0K9 141 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 CEACAM19Q7Z692 300 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 RDH10Q8IZV5 341 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 C17orf47Q8NEP4 570 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 ZMYND19Q96E35 227 aaPredicted RBP26.56■■□□□ 1.84
SSBP3-204ENST00000371320 SPRTNQ9H040 489 aaPredicted RBP26.56■■□□□ 1.84
SSBP3-204ENST00000371320 SYNDIG1Q9H7V2 258 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 PCDHGB7Q9Y5F8 929 aa26.56■■□□□ 1.84
SSBP3-204ENST00000371320 LRRN3E7EW58 273 aa26.55■■□□□ 1.84
SSBP3-204ENST00000371320 HLA-DQB1P01920 261 aa26.55■■□□□ 1.84
SSBP3-204ENST00000371320 SRFP11831 508 aa26.55■■□□□ 1.84
SSBP3-204ENST00000371320 SERTAD2Q14140 314 aa26.55■■□□□ 1.84
SSBP3-204ENST00000371320 RPTNQ6XPR3 784 aa26.55■■□□□ 1.84
SSBP3-204ENST00000371320 SSX6Q7RTT6 188 aa26.55■■□□□ 1.84
SSBP3-204ENST00000371320 ENKURQ8TC29 256 aa26.55■■□□□ 1.84
SSBP3-204ENST00000371320 LRRN3Q9H3W5 708 aa26.55■■□□□ 1.84
SSBP3-204ENST00000371320 A0A1W2PR77 199 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 HYAL3O43820 417 aaPredicted RBP26.54■■□□□ 1.84
SSBP3-204ENST00000371320 CD1CP29017 333 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 PYCR1P32322 319 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 RPL4P36578 427 aaKnown RBP26.54■■□□□ 1.84
SSBP3-204ENST00000371320 ACVR1BP36896 505 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 NR4A2P43354 598 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 RIN1Q13671 783 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 FAM27D1Q5T7N8 215 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 OR5J2Q8NH18 312 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 PELOQ9BRX2 385 aaKnown RBP26.54■■□□□ 1.84
SSBP3-204ENST00000371320 MOV10Q9HCE1 1003 aaKnown RBP26.54■■□□□ 1.84
SSBP3-204ENST00000371320 B3GAT2Q9NPZ5 323 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 NOX1Q9Y5S8 564 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 TLCD2A6NGC4 264 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 B4DXG7 233 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 CLPSP04118 112 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 MYL9P24844 172 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 MAOBP27338 520 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 KLHL26Q53HC5 615 aa26.54■■□□□ 1.84
SSBP3-204ENST00000371320 C17orf105B2RV13 164 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 H0YIG0 161 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 ELK1P19419 428 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 IGFBP4P22692 258 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 KIR2DL3P43628 341 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 HCCSP53701 268 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 DMKNQ6E0U4 476 aaPredicted RBP26.53■■□□□ 1.84
SSBP3-204ENST00000371320 DPY19L2P2Q6ZN68 376 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 ZNF440Q8IYI8 595 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 C3orf49Q96BT1 292 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 NEK6Q9HC98 313 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 ADAM18Q9Y3Q7 739 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 MAU2Q9Y6X3 613 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 METTL12A8MUP2 240 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 PRKNO60260 465 aaPredicted RBP26.53■■□□□ 1.84
SSBP3-204ENST00000371320 GALNSP34059 522 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 NRG3P56975 720 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 ATAD3CQ5T2N8 411 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 SCAIQ8N9R8 606 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 OR51L1Q8NGJ5 315 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 PGLYRP3Q96LB9 341 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms