RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CPNE4Q96A23 557 aaPredicted RBP13.32□□□□□ -0.28
COL9A1-204ENST00000370496 DDIT4LQ96D03 193 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 NSL1Q96IY1 281 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 ZNF559Q9BR84 538 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 COQ10BQ9H8M1 238 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 SELENONQ9NZV5 590 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 TMEM181Q9P2C4 612 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 OSGIN1Q9UJX0 560 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 PRDM4Q9UKN5 801 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 BAG5Q9UL15 447 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 SLC9A8Q9Y2E8 581 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 A0A1W2PNR3 127 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 GMNNO75496 209 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 TOXO94900 526 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 CLDN14O95500 239 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 TGM6O95932 706 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 LGI1O95970 557 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 FESP07332 822 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 C8BP07358 591 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 TMIGD3P0DMS9 266 aaPredicted RBP13.32□□□□□ -0.28
COL9A1-204ENST00000370496 HTR2AP28223 471 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 ZNF136P52737 540 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 CRYBA2P53672 197 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 CARD18P57730 90 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 ZNF239Q16600 458 aaKnown RBP13.32□□□□□ -0.28
COL9A1-204ENST00000370496 CYBRD1Q53TN4 286 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 SAMD4BQ5PRF9 694 aaKnown RBP13.32□□□□□ -0.28
COL9A1-204ENST00000370496 OR2A2Q6IF42 318 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 GCNT2Q8N0V5 402 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 RNF148Q8N7C7 305 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 NAXEQ8NCW5 288 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 RNF217Q8TC41 542 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 FAM162AQ96A26 154 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 ZFP3Q96NJ6 502 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 UCN2Q96RP3 112 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 ARHGDIGQ99819 225 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 RSPO3Q9BXY4 272 aaPredicted RBP13.32□□□□□ -0.28
COL9A1-204ENST00000370496 TRIM2Q9C040 744 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 OR11A1Q9GZK7 315 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 DOPEY2Q9Y3R5 2298 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 TMEM72A0PK05 275 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 ELOA3DA6NLF2 546 aaPredicted RBP13.31□□□□□ -0.28
COL9A1-204ENST00000370496 B2RBV5 119 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 DVL2O14641 736 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 PLGP00747 810 aaPredicted RBP13.31□□□□□ -0.28
COL9A1-204ENST00000370496 TCN1P20061 433 aaPredicted RBP13.31□□□□□ -0.28
COL9A1-204ENST00000370496 BMP5P22003 454 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 FKBP2P26885 142 aaKnown RBP13.31□□□□□ -0.28
COL9A1-204ENST00000370496 CEACAM8P31997 349 aaPredicted RBP13.31□□□□□ -0.28
COL9A1-204ENST00000370496 KDELR2P33947 212 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 CSNK2A1P68400 391 aaPredicted RBP13.31□□□□□ -0.28
COL9A1-204ENST00000370496 NRF1Q16656 503 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 ELOA3BQ3SY89 546 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 ADGRG3Q86Y34 549 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 RBM15BQ8NDT2 890 aaKnown RBP13.31□□□□□ -0.28
COL9A1-204ENST00000370496 ELOA3Q8NG57 546 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 LZICQ8WZA0 190 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 OSTF1Q92882 214 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 C3orf49Q96BT1 292 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 DNAJA3Q96EY1 480 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 TPD52L3Q96J77 140 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 SRXN1Q9BYN0 137 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 TMEM27Q9HBJ8 222 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 ADPRHL2Q9NX46 363 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 EGFL7Q9UHF1 273 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 PACSIN3Q9UKS6 424 aa13.31□□□□□ -0.28
COL9A1-204ENST00000370496 PCNX1Q96RV3 2341 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 A0A1B0GWA3 101 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 SULT2B1O00204 365 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 ZNF208O43345 1280 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 ZNF682O95780 498 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 NCK1P16333 377 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 TNFRSF1BP20333 461 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 DIO1P49895 249 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 MAP2K6P52564 334 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 MYBPHQ13203 477 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 ALG10BQ5I7T1 473 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 MAMDC2Q7Z304 686 aaPredicted RBP13.3□□□□□ -0.28
COL9A1-204ENST00000370496 CARM1Q86X55 608 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 MCEMP1Q8IX19 187 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 LSMEM1Q8N8F7 131 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 CNEP1R1Q8N9A8 125 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 FAM156AQ8NDB6 213 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 OR6T1Q8NGN1 323 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 DNAJA4Q8WW22 397 aaPredicted RBP13.3□□□□□ -0.28
COL9A1-204ENST00000370496 INTS12Q96CB8 462 aaKnown RBP13.3□□□□□ -0.28
COL9A1-204ENST00000370496 ZHX1-C8orf76Q96EF9 292 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 MCHR1Q99705 422 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 SFXN3Q9BWM7 321 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 ADAM19Q9H013 955 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 RNF122Q9H9V4 155 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 SH3GLB1Q9Y371 365 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 HDGFL3Q9Y3E1 203 aa13.3□□□□□ -0.28
COL9A1-204ENST00000370496 MED12LQ86YW9 2145 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 CACNA1CQ13936 2221 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 CPSF4LA6NMK7 179 aaKnown RBP13.29□□□□□ -0.28
COL9A1-204ENST00000370496 EEF1E1-BLOC1S5C9J1V9 151 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 PRSS44E7EML9 344 aa13.29□□□□□ -0.28
COL9A1-204ENST00000370496 EEF1E1O43324 174 aaKnown RBP13.29□□□□□ -0.28
COL9A1-204ENST00000370496 FMO6PO60774 539 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms