RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TMEM43Q9BTV4 400 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 SMIM3Q9BZL3 60 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 GSX2Q9BZM3 304 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 WASF3Q9UPY6 502 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 OR5K4A6NMS3 321 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 B3GALT4O96024 378 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 ACVR1Q04771 509 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 ARL6IP1Q15041 203 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 TIGD3Q6B0B8 471 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 LCN10Q6JVE6 187 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 SEC22CQ9BRL7 303 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 HCAR1Q9BXC0 346 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 ADAM29Q9UKF5 820 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 IGLV3-10A0A075B6K4 115 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 SOCS7O14512 581 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 MED6O75586 246 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 ELK1P19419 428 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 MMP11P24347 488 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 EXOSC7Q15024 291 aaKnown RBP14.86□□□□□ -0.03
COL17A1-202ENST00000369733 CLVS2Q5SYC1 327 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 MRPL2Q5T653 305 aaKnown RBP14.86□□□□□ -0.03
COL17A1-202ENST00000369733 IDO2Q6ZQW0 420 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 ADAMTS18Q8TE60 1221 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 BORCS8Q96FH0 119 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 ABI3Q9P2A4 366 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 TMEM129A0AVI4 362 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 AIFM1O95831 613 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 TRIM23P36406 574 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 USP51Q70EK9 711 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 RASGRP3Q8IV61 690 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 SCARB1Q8WTV0 552 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 BMFQ96LC9 184 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 C1QTNF3Q9BXJ4 246 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 PLSCR3Q9NRY6 295 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 TESQ9UGI8 421 aaKnown RBP14.85□□□□□ -0.03
COL17A1-202ENST00000369733 CPED1A4D0V7 1026 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 OIP5O43482 229 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 TGM1P22735 817 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 FXYD4P59646 89 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 TEKQ02763 1124 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 C3orf33Q6P1S2 294 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 HTR3DQ70Z44 454 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 TAS1R1Q7RTX1 841 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 SLC51BQ86UW2 128 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 TCEAL8Q8IYN2 117 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 OR52E1Q8NGJ3 308 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 OR6T1Q8NGN1 323 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 TANKQ92844 425 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 SDHAF2Q9NX18 166 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 VSTM2BA6NLU5 285 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 CPEP16870 476 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 PAQR6Q6TCH4 344 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 OR52R1Q8NGF1 315 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 KLHDC7BQ96G42 594 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 TSPAN11A1L157 253 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 OR2T7P0C7T2 308 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 TMEM225BP0DP42 221 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 ITGB7P26010 798 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 SPOCK1Q08629 439 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 DDX60LQ5H9U9 1706 aaKnown RBP14.85□□□□□ -0.03
COL17A1-202ENST00000369733 ZNF852Q6ZMS4 543 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 OR2T27Q8NH04 317 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 OR14A2Q96R54 314 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 SLC17A9Q9BYT1 436 aa14.85□□□□□ -0.03
COL17A1-202ENST00000369733 KLF8O95600 359 aaPredicted RBP14.84□□□□□ -0.03
COL17A1-202ENST00000369733 CSF3P09919 207 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 OR8G3PP0DMU2 310 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 DUSP7Q16829 419 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 DEFB110Q30KQ9 67 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 FIP1L1Q6UN15 594 aaKnown RBP14.84□□□□□ -0.03
COL17A1-202ENST00000369733 SEC22AQ96IW7 307 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 ICKQ9UPZ9 632 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 TRAPPC6AO75865 159 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 RPL34P49207 117 aaKnown RBP14.84□□□□□ -0.03
COL17A1-202ENST00000369733 GLO1Q04760 184 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 C1orf61Q13536 156 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 XAF1Q6GPH4 301 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 GPR155Q7Z3F1 870 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 PDE7BQ9NP56 450 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 C19orf25Q9UFG5 118 aaPredicted RBP14.84□□□□□ -0.03
COL17A1-202ENST00000369733 GGT3PA6NGU5 568 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 ATP1B1P05026 303 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 FBLP22087 321 aaKnown RBP14.84□□□□□ -0.03
COL17A1-202ENST00000369733 CCR9P51686 369 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 GPLD1P80108 840 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 VASH1Q7L8A9 365 aaPredicted RBP14.84□□□□□ -0.03
COL17A1-202ENST00000369733 SUMF2Q8NBJ7 301 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 TMEM255BQ8WV15 326 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 NINJ1Q92982 152 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 FAM71F1Q96KD3 344 aaPredicted RBP14.84□□□□□ -0.03
COL17A1-202ENST00000369733 ARPC5LQ9BPX5 153 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 HHLA2Q9UM44 414 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 SLC6A14Q9UN76 642 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 A8MVJ9 347 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 SIX6O95475 246 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 C5AR1P21730 350 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 FPR3P25089 353 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 DUSP6Q16828 381 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 TMUB2Q71RG4 321 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 RBM45Q8IUH3 476 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms