RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TEKT2Q9UIF3 430 aa13.17□□□□□ -0.3
CD48-201ENST00000368045 CA5BQ9Y2D0 317 aa13.17□□□□□ -0.3
CD48-201ENST00000368045 DOCK9Q9BZ29 2069 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 BLACEA4D250 179 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 OR5K4A6NMS3 321 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 EFCAB7A8K855 629 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 CTDSPLO15194 276 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 GSTZ1O43708 216 aaPredicted RBP13.16□□□□□ -0.3
CD48-201ENST00000368045 CPNE3O75131 537 aaKnown RBP13.16□□□□□ -0.3
CD48-201ENST00000368045 OR2B3O76000 313 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 UCHL1P09936 223 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 TFPIP10646 304 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 CLUP10909 449 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 BTCP35070 178 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 ACVR1BP36896 505 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 LSSP48449 732 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 GPR143P51810 404 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 UBE2IP63279 158 aaKnown RBP13.16□□□□□ -0.3
CD48-201ENST00000368045 HSF2Q03933 536 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 TCEA2Q15560 299 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 ISXQ2M1V0 245 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 CDONQ4KMG0 1287 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 SLC35D3Q5M8T2 416 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 FCRLBQ6BAA4 426 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 RPL22L1Q6P5R6 122 aaKnown RBP13.16□□□□□ -0.3
CD48-201ENST00000368045 ZAR1Q86SH2 424 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 LRRC17Q8N6Y2 441 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 ERMAPQ96PL5 475 aaPredicted RBP13.16□□□□□ -0.3
CD48-201ENST00000368045 GFM1Q96RP9 751 aaKnown RBP13.16□□□□□ -0.3
CD48-201ENST00000368045 ABHD1Q96SE0 405 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 CCDC3Q9BQI4 270 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 MED28Q9H204 178 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 IGFLR1Q9H665 355 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 KLHL1Q9NR64 748 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 USP36Q9P275 1121 aaKnown RBP13.16□□□□□ -0.3
CD48-201ENST00000368045 CPNE7Q9UBL6 633 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 RPS6KB2Q9UBS0 482 aa13.16□□□□□ -0.3
CD48-201ENST00000368045 KIR2DS5A0A0G2JLQ3 304 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 A0A0G2JNG1 304 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 KIR2DS3K7RE56 304 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 GPRIN2O60269 458 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 NGFRP08138 427 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 EPXP11678 715 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 S1PR1P21453 382 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 STOMP27105 288 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 DIO1P49895 249 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 GDI2P50395 445 aaKnown RBP13.15□□□□□ -0.3
CD48-201ENST00000368045 CRYZQ08257 329 aaKnown RBP13.15□□□□□ -0.3
CD48-201ENST00000368045 KIR2DS5Q14953 304 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 BTBD16Q32M84 506 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 SLC25A35Q3KQZ1 300 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 SLC36A2Q495M3 483 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 DPY19L2P2Q6ZN68 376 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 SLITRK4Q8IW52 837 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 SLC35F2Q8IXU6 374 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 FAM98AQ8NCA5 519 aaKnown RBP13.15□□□□□ -0.3
CD48-201ENST00000368045 GPBAR1Q8TDU6 330 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 THAP4Q8WY91 577 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 SGTBQ96EQ0 304 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 OR2M2Q96R28 347 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 CCNL2Q96S94 520 aaPredicted RBP13.15□□□□□ -0.3
CD48-201ENST00000368045 RPP25Q9BUL9 199 aaKnown RBP13.15□□□□□ -0.3
CD48-201ENST00000368045 GHITMQ9H3K2 345 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 DIABLOQ9NR28 239 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 WDR70Q9NW82 654 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 CAMK2AQ9UQM7 478 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 HS3ST3A1Q9Y663 406 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 COL4A2P08572 1712 aa13.15□□□□□ -0.3
CD48-201ENST00000368045 A0A0A6YYJ9 748 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 LRRN3E7EW58 273 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 NPIPB9F8W1W9 429 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 ZNF749O43361 778 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 PVRP15151 417 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 EVI2BP34910 448 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 EMDP50402 254 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 SIRPAP78324 504 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 PSG6Q00889 435 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 FGFBP1Q14512 234 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 PON3Q15166 354 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 CD276Q5ZPR3 534 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.31
CD48-201ENST00000368045 UNQ9370/PRO34162Q6UXP9 181 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 RPTNQ6XPR3 784 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 ZNF782Q6ZMW2 699 aaPredicted RBP13.15□□□□□ -0.31
CD48-201ENST00000368045 SSX6Q7RTT6 188 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 OOSP2Q86WS3 158 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 C7orf61Q8IZ16 206 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 DNAJC5GQ8N7S2 189 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 ZNF614Q8N883 585 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 OR52E2Q8NGJ4 325 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 OR14A16Q8NHC5 309 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 TTC9Q92623 222 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 YIPF5Q969M3 257 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 PELI1Q96FA3 418 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 PTCHD1Q96NR3 888 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 G6PC3Q9BUM1 346 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 LRRN3Q9H3W5 708 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 HRASLS2Q9NWW9 162 aa13.15□□□□□ -0.31
CD48-201ENST00000368045 FBXL4Q9UKA2 621 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms