RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 PLPP2O43688 288 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 MPZL1O95297 269 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 IGLV1-44P01699 117 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 HPXP02790 462 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 RNASE1P07998 156 aaKnown RBP12.6□□□□□ -0.39
VAMP4-202ENST00000367740 CDH2P19022 906 aaPredicted RBP12.6□□□□□ -0.39
VAMP4-202ENST00000367740 ASMTP46597 345 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 SERPINB4P48594 390 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 HTR6P50406 440 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 PRKAG1P54619 331 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 CDH13P55290 713 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 POU3F1Q03052 451 aaPredicted RBP12.6□□□□□ -0.39
VAMP4-202ENST00000367740 SLC9B1Q4ZJI4 515 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 FAM71E1Q6IPT2 247 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 KLC3Q6P597 504 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 LEG1Q6P5S2 330 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 RBMS3Q6XE24 437 aaKnown RBP12.6□□□□□ -0.39
VAMP4-202ENST00000367740 MYPOPQ86VE0 399 aaPredicted RBP12.6□□□□□ -0.39
VAMP4-202ENST00000367740 RFWD2Q8NHY2 731 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 WFDC12Q8WWY7 111 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 YIPF5Q969M3 257 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 DNAJA3Q96EY1 480 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 ANKRD27Q96NW4 1050 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 MS4A4EQ96PG1 132 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 GIN1Q9NXP7 522 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 OPN4Q9UHM6 478 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 FLVCR1Q9Y5Y0 555 aa12.6□□□□□ -0.39
VAMP4-202ENST00000367740 ARHGAP32A7KAX9 2087 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 TUBA1BP68363 451 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 TUBA4AP68366 448 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 C3orf36Q3SXR2 165 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 TBRG1Q3YBR2 411 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 EXOSC6Q5RKV6 272 aaKnown RBP12.59□□□□□ -0.39
VAMP4-202ENST00000367740 DCAF12L2Q5VW00 463 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 ACSM5Q6NUN0 579 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 LRIG3Q6UXM1 1119 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 TUBA1AQ71U36 451 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 SZRD1Q7Z422 152 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 RIBC1Q8N443 379 aaPredicted RBP12.59□□□□□ -0.39
VAMP4-202ENST00000367740 TMCO5AQ8N6Q1 288 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 OR5W2Q8NH69 310 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 RDH5Q92781 318 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 ZHX1-C8orf76Q96EF9 292 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 CCT8L2Q96SF2 557 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 TRIM31Q9BZY9 425 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 ZNF665Q9H7R5 613 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 SLC9A8Q9Y2E8 581 aa12.59□□□□□ -0.39
VAMP4-202ENST00000367740 A0A096LPK6 155 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 HMX2A2RU54 273 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 PPIHO43447 177 aaKnown RBP12.58□□□□□ -0.4
VAMP4-202ENST00000367740 DEAF1O75398 565 aaPredicted RBP12.58□□□□□ -0.4
VAMP4-202ENST00000367740 PMS2P2O95744 297 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 HSPA4LO95757 839 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 KRT6AP02538 564 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 KRT6BP04259 564 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 ALOX5P09917 674 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 ANPEPP15144 967 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 RBMXP38159 391 aaKnown RBP12.58□□□□□ -0.4
VAMP4-202ENST00000367740 MAGEA8P43361 318 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 KRT6CP48668 564 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 CCR4P51679 360 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 POU6F2P78424 691 aaPredicted RBP12.58□□□□□ -0.4
VAMP4-202ENST00000367740 CBFBQ13951 182 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 ZNF311Q5JNZ3 666 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 C3orf62Q6ZUJ4 267 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 RHOUQ7L0Q8 258 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 ARL8AQ96BM9 186 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 C16orf58Q96GQ5 468 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 ARL5BQ96KC2 179 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 OSBPL9Q96SU4 736 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.58□□□□□ -0.4
VAMP4-202ENST00000367740 SIRT5Q9NXA8 310 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 JRKLQ9Y4A0 524 aa12.58□□□□□ -0.4
VAMP4-202ENST00000367740 H3BNH8 94 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 M0QZ24 198 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 GTPBP1O00178 669 aaKnown RBP12.57□□□□□ -0.4
VAMP4-202ENST00000367740 NR5A2O00482 541 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 DNPH1O43598 174 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 RP2O75695 350 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 CELA3BP08861 270 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 GPC1P35052 558 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 TMEM33P57088 247 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 DR1Q01658 176 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 BTKQ06187 659 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 MERTKQ12866 999 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 BAMBIQ13145 260 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 MSMPQ1L6U9 139 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 MROH9Q5TGP6 573 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 SPC24Q8NBT2 197 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 OR1K1Q8NGR3 316 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 SLC25A43Q8WUT9 341 aaPredicted RBP12.57□□□□□ -0.4
VAMP4-202ENST00000367740 ST8SIA1Q92185 356 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 CDS1Q92903 461 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 ZNF48Q96MX3 618 aaPredicted RBP12.57□□□□□ -0.4
VAMP4-202ENST00000367740 BTBD2Q9BX70 525 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 SERINC1Q9NRX5 453 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 PARPBPQ9NWS1 579 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 TMCO1Q9UM00 188 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 MMP24Q9Y5R2 645 aa12.57□□□□□ -0.4
VAMP4-202ENST00000367740 ARPC4-TTLL3A0A0A6YYG9 625 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms