RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CATSPER4Q7RTX7 472 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 KIAA1328Q86T90 577 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 FANK1Q8TC84 345 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 ARPC1AQ92747 370 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 TIMD4Q96H15 378 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 FAM111AQ96PZ2 611 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 ZNF385DQ9H6B1 395 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 CALHM2Q9HA72 323 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 PIKFYVEQ9Y2I7 2098 aa2.53□□□□□ -2.01
RNU4-28P-201ENST00000364739 FRMPD4Q14CM0 1322 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 IGHV3OR16-13A0A075B7E8 117 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 MED6O75586 246 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 OTX2P32243 289 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 LEPP41159 167 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 TAS2R19P59542 299 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 ACTA1P68133 377 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 ZNF763Q0D2J5 394 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 MOBPQ13875 183 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 KLF17Q5JT82 389 aaPredicted RBP2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 C6orf89Q6UWU4 347 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 RBM43Q6ZSC3 357 aaKnown RBP2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 DENND6BQ8NEG7 585 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 NDRG1Q92597 394 aaKnown RBP2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 RSPO3Q9BXY4 272 aaPredicted RBP2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 PLGRKTQ9HBL7 147 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 PHF11Q9UIL8 331 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 ALG6Q9Y672 507 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 V9GY05 133 aa2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 TET2Q6N021 2002 aaPredicted RBP2.52□□□□□ -2.01
RNU4-28P-201ENST00000364739 ATP10DQ9P241 1426 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 GAKO14976 1311 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 RNF103-CHMP3A0A140T963 221 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 E7ESA3 106 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 CCER2I3L3R5 266 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 LAD1O00515 517 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 UGT2B17O75795 530 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 CRISP2P16562 243 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 POLR2EP19388 210 aaKnown RBP2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 HOXA9P31269 272 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 LONP1P36776 959 aaKnown RBP2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 ARL6IP1Q15041 203 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 LINC00483Q53H64 154 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 C1orf100Q5SVJ3 147 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 PLBD1Q6P4A8 553 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 ZNF621Q6ZSS3 439 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 ABHD12BQ7Z5M8 362 aaPredicted RBP2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 TPRA1Q86W33 373 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 ATP6V0D2Q8N8Y2 350 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 MRPL43Q8N983 215 aaKnown RBP2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 BRSK1Q8TDC3 778 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 ACER1Q8TDN7 264 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 TCTEX1D2Q8WW35 142 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 ST8SIA1Q92185 356 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 MYLPFQ96A32 169 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 FAM210BQ96KR6 192 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 C12orf66Q96MD2 445 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 HSD3B7Q9H2F3 369 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 RHBGQ9H310 441 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 DEC1Q9P2X7 70 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 TRAF3IP3Q9Y228 551 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 MAD1L1Q9Y6D9 718 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 CLCA3PQ9Y6N3 262 aa2.51□□□□□ -2.01
RNU4-28P-201ENST00000364739 IGLV4-60A0A075B6I1 120 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 E9PBE3 544 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 G3V4G9 280 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 HCRTR1O43613 425 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 ICAM2P13598 275 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 ADRB3P13945 408 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 TPSB2P20231 275 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 CXCR2P25025 360 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 EFNB2P52799 333 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 TPSAB1Q15661 275 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 TRIM16LQ309B1 348 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 GPRC6AQ5T6X5 926 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 CBLN3Q6UW01 205 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 TMIGD1Q6UXZ0 262 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 ZNF695Q8IW36 515 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 TMEM61Q8N0U2 210 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 ZNF596Q8TC21 504 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 GIMAP1Q8WWP7 306 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 FGF11Q92914 225 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 NAT9Q9BTE0 207 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 OR11A1Q9GZK7 315 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 NXF5Q9H1B4 397 aaKnown RBP2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 TPK1Q9H3S4 243 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 EML4Q9HC35 981 aaKnown RBP2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 NUFIP1Q9UHK0 495 aaKnown RBP2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 PIN4Q9Y237 131 aaKnown RBP2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 TRAPPC4Q9Y296 219 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 GSTK1Q9Y2Q3 226 aa2.5□□□□□ -2.01
RNU4-28P-201ENST00000364739 NUP214P35658 2090 aaPredicted RBP2.49□□□□□ -2.01
RNU4-28P-201ENST00000364739 PPIAL4CA0A0B4J2A2 164 aa2.49□□□□□ -2.01
RNU4-28P-201ENST00000364739 A0A1B0GUL7 405 aa2.49□□□□□ -2.01
RNU4-28P-201ENST00000364739 A0A1B0GUS0 222 aa2.49□□□□□ -2.01
RNU4-28P-201ENST00000364739 KRT87PA6NCN2 255 aa2.49□□□□□ -2.01
RNU4-28P-201ENST00000364739 CHADO15335 359 aa2.49□□□□□ -2.01
RNU4-28P-201ENST00000364739 MSH4O15457 936 aa2.49□□□□□ -2.01
RNU4-28P-201ENST00000364739 SEC22BO75396 215 aa2.49□□□□□ -2.01
RNU4-28P-201ENST00000364739 UFL1O94874 794 aa2.49□□□□□ -2.01
RNU4-28P-201ENST00000364739 PPIAL4GP0DN37 164 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms