RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 RAP1BP61224 184 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 GPNMBQ14956 572 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 NRF1Q16656 503 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 C6orf89Q6UWU4 347 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 TMIGD1Q6UXZ0 262 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 Q6ZN92 141 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 LRRC43Q8N309 656 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 CCDC54Q8NEL0 328 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 CTNNBL1Q8WYA6 563 aaPredicted RBP2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 MRPS31Q92665 395 aaKnown RBP2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 RIT2Q99578 217 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 EDEM2Q9BV94 578 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 MRPL13Q9BYD1 178 aaKnown RBP2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 POLR1EQ9GZS1 481 aaKnown RBP2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 TMEM117Q9H0C3 514 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 RHBGQ9H310 441 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 CALHM2Q9HA72 323 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 SLC17A5Q9NRA2 495 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 PHF11Q9UIL8 331 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 COPS3Q9UNS2 423 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 GSTK1Q9Y2Q3 226 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 U3KQV3 271 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 LTBP1Q14766 1721 aa2.19□□□□□ -2.06
RNU4-1-201ENST00000363925 ATP10DQ9P241 1426 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 ARID1AO14497 2285 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 IGHV3OR16-13A0A075B7E8 117 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 ANKRD63C9JTQ0 380 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 CLDN3O15551 220 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 MBTPS2O43462 519 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 MFN2O95140 757 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 PCCBP05166 539 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 CCDC130P13994 396 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 ABOP16442 354 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 ATP6V1C1P21283 382 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 TBXA2RP21731 343 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 CD80P33681 288 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 KLK7P49862 253 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 HERVK_113P61574 105 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 TP53I3Q53FA7 332 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 SAMD4BQ5PRF9 694 aaKnown RBP2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 TIGD3Q6B0B8 471 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 ZNF573Q86YE8 665 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 SVOPLQ8N434 492 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 MDS2Q8NDY4 140 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 OR51G1Q8NGK1 321 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 OR9G1Q8NH87 305 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 MAIP1Q8WWC4 291 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 SRSF12Q8WXF0 261 aaKnown RBP2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 TMEM158Q8WZ71 300 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 SH3YL1Q96HL8 342 aaPredicted RBP2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 C4orf36Q96KX1 117 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 HIST1H4GQ99525 98 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 THUMPD2Q9BTF0 503 aaKnown RBP2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 SMYD3Q9H7B4 428 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 FARSBQ9NSD9 589 aaKnown RBP2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 DEC1Q9P2X7 70 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 KIF25Q9UIL4 384 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 PSG11Q9UQ72 335 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 PRG3Q9Y2Y8 225 aaPredicted RBP2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 OR10H1Q9Y4A9 318 aa2.18□□□□□ -2.06
RNU4-1-201ENST00000363925 SF3B1O75533 1304 aaKnown RBP eCLIP2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 PDS5BQ9NTI5 1447 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 IGKV6-21A0A0C4DH24 114 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 TRDCB7Z8K6 153 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 CTAGE5O15320 804 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 RGS16O15492 202 aaPredicted RBP2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 RS1O15537 224 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 NEBLO76041 1014 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 LGI1O95970 557 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 IFNB1P01574 187 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 OPN1MWP04001 364 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 PCCAP05165 728 aaPredicted RBP2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 H2BFMP0C1H6 154 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 PNMA6AP0CW24 399 aaPredicted RBP2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 OPN1MW2P0DN77 364 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 OPN1MW3P0DN78 364 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 RCC1P18754 421 aaPredicted RBP2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 FMO3P31513 532 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 LONP1P36776 959 aaKnown RBP2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 VDAC2P45880 294 aaPredicted RBP2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 KPNA2P52292 529 aaKnown RBP2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 PKNOX1P55347 436 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 KRTAP10-8P60410 259 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 POLR2FP61218 127 aaKnown RBP2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 ACTA1P68133 377 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 EBI3Q14213 229 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 CDC37Q16543 378 aaPredicted RBP2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 NSUN5P1Q3KNT7 163 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 BOLA3Q53S33 107 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 TPGS2Q68CL5 300 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 OR52W1Q6IF63 320 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 LRRC31Q6UY01 552 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 ACP7Q6ZNF0 438 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 GDPD3Q7L5L3 318 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 MFSD6LQ8IWD5 586 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 CLDN19Q8N6F1 224 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 FADS6Q8N9I5 356 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 OR10A7Q8NGE5 316 aa2.17□□□□□ -2.06
RNU4-1-201ENST00000363925 OR10T2Q8NGX3 314 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms