RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 OR7A5Q15622 319 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 WDR5BQ86VZ2 330 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 APIPQ96GX9 242 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 ZNF891A8MT65 544 aaPredicted RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 NUDT21O43809 227 aaKnown RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 ITGAMP11215 1152 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 EEF1A2Q05639 463 aaKnown RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 ZNF266Q14584 549 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 ZADH2Q8N4Q0 377 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 OR56B4Q8NH76 319 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 CDK1P06493 297 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 ADH4P08319 380 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 EVX2Q03828 476 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 CAMK2BQ13554 666 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 APOOQ9BUR5 198 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 AJAP1Q9UKB5 411 aaPredicted RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 A0A0D9SG52 128 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 KDM4FA0A1W2PPD8 638 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 GLB1P16278 677 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 RFPL4BQ6ZWI9 263 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 OR4D6Q8NGJ1 314 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 OR2T35Q8NGX2 323 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 TIMM29Q9BSF4 260 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 SORL1Q92673 2214 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 TRAV18A0A075B6X5 111 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 SLC22A23A1A5C7 686 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 VIPR2P41587 438 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 KCTD12Q96CX2 325 aaKnown RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 TEX10Q9NXF1 929 aaPredicted RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 DICER1Q9UPY3 1922 aaKnown RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 MCRIP1C9JLW8 97 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 RAB3DO95716 219 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 HBE1P02100 147 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 CDK4P11802 303 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 HLA-DOBP13765 273 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 CD79BP40259 229 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 CSNK1DP48730 415 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 GSK3AP49840 483 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 RPS23P62266 143 aaKnown RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 ZNF322Q6U7Q0 402 aaPredicted RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 SUMF2Q8NBJ7 301 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 ZPBPQ9BS86 351 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 TP63Q9H3D4 680 aaPredicted RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 NKX1-2Q9UD57 310 aaPredicted RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 FAM72CH0Y354 149 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 SNNO75324 88 aaPredicted RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 SLC2A1P11166 492 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 DEFA4P12838 97 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 HTR2BP41595 481 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 FAM72AQ5TYM5 149 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 FAM72DQ6L9T8 149 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 RPL22L1Q6P5R6 122 aaKnown RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 FAM72BQ86X60 149 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 GCNT2Q8N0V5 402 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 TMEM151AQ8N4L1 468 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 ASF1BQ9NVP2 202 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 PAQR5Q9NXK6 330 aaPredicted RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 SLC23A2Q9UGH3 650 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 NOSIPQ9Y314 301 aaKnown RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 HLA-AP01891 365 aaKnown RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 SLURP2P0DP57 97 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 INHBCP55103 352 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 LETMD1Q6P1Q0 360 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 ASRGL1Q7L266 308 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 MDGA1Q8NFP4 955 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 OR52R1Q8NGF1 315 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 PPIL3Q9H2H8 161 aaKnown RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 A0A0U1RQK1 487 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 KLRC4-KLRK1H3BQV0 150 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 NPBWR1P48145 328 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 RBMXL3Q8N7X1 1067 aaKnown RBP9.07□□□□□ -0.96
CUX1-203ENST00000360264 ZNF321PQ8N8H1 164 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 OR4K5Q8NGD3 323 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 OR4A16Q8NH70 328 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 OCSTAMPQ9BR26 566 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 POT1Q9NUX5 634 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 RIMS3Q9UJD0 308 aa9.07□□□□□ -0.96
CUX1-203ENST00000360264 RAP2BP61225 183 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 AADACL3Q5VUY0 350 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 SLC16A14Q7RTX9 510 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 NKAIN3Q8N8D7 197 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 PIGQQ9BRB3 760 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 GNG12Q9UBI6 72 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 DPM1O60762 260 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 AKR1C1Q04828 323 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 ZNF542PQ5EBM4 170 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 HES5Q5TA89 166 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 ATPAF1Q5TC12 328 aaPredicted RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 TSSK4Q6SA08 328 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 METAP1DQ6UB28 335 aaPredicted RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 FRZBQ92765 325 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 BOCQ9BWV1 1114 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 GPR52Q9Y2T5 361 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 ARPC4-TTLL3A0A0A6YYG9 625 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 SMIM30A4D0T7 59 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 RFPL3O75679 317 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 GSTP1P09211 210 aaKnown RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 BCKDHBP21953 392 aa9.06□□□□□ -0.96
CUX1-203ENST00000360264 HOXA1P49639 335 aaPredicted RBP9.06□□□□□ -0.96
CUX1-203ENST00000360264 HNF4GQ14541 408 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms