RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 MEP1AQ16819 746 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 CRTC2Q53ET0 693 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 SLX4IPQ5VYV7 408 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 FCRLBQ6BAA4 426 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 TMEM154Q6P9G4 183 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 IL20RBQ6UXL0 311 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 LINC00114Q6XXX2 140 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 Q6ZPB1 254 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 ATG4DQ86TL0 474 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 GPALPP1Q8IXQ4 340 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 CLDN22Q8N7P3 220 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 PFN4Q8NHR9 129 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 DUSP19Q8WTR2 217 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 FBLIM1Q8WUP2 373 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 KCNE4Q8WWG9 221 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 THAP4Q8WY91 577 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 TMEM234Q8WY98 164 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 HDAC2Q92769 488 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 THOC3Q96J01 351 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 SLC19A3Q9BZV2 496 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 HPF1Q9NWY4 346 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 TAS2R10Q9NYW0 307 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 WIF1Q9Y5W5 379 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 SPTAN1Q13813 2472 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 HTR3EA5X5Y0 456 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 UNC119BA6NIH7 251 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 ZNF891A8MT65 544 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 EFCAB9A8MZ26 197 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 MASP2O00187 686 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 GMFGO60234 142 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 MAN1A2O60476 641 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 MPZL2O60487 215 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 PTGDSP41222 190 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 AIMP2Q13155 320 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 SNTA1Q13424 505 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 BLMHQ13867 455 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 MAD2L1BPQ15013 274 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 QPRTQ15274 297 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 RBM48Q5RL73 367 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 BROXQ5VW32 411 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 RPL13AP3Q6NVV1 102 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 SLC30A6Q6NXT4 461 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 ISLR2Q6UXK2 745 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 ZNF620Q6ZNG0 422 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 RTL4Q6ZR62 310 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 TMPRSS11FQ6ZWK6 438 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 VASH2Q86V25 355 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 MEX3DQ86XN8 651 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 SPACA3Q8IXA5 215 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 CLEC1AQ8NC01 280 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 SNIP1Q8TAD8 396 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 BRIX1Q8TDN6 353 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 OSTF1Q92882 214 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 BPIFA2Q96DR5 249 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 GPA33Q99795 319 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 TMEM43Q9BTV4 400 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 PRRG3Q9BZD7 231 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 DPH1Q9BZG8 443 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 DSN1Q9H410 356 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 SLC25A19Q9HC21 320 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 CPNE5Q9HCH3 593 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 GALNT9Q9HCQ5 603 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 TBC1D23Q9NUY8 699 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 ABI3Q9P2A4 366 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 BLOC1S6Q9UL45 172 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 PCDHGB6Q9Y5F9 930 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 CHCHD2Q9Y6H1 151 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 CDH10Q9Y6N8 788 aa12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 UBR5O95071 2799 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-203ENST00000359265 IGLV3-32A0A0A0MS00 114 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 ENO4A6NNW6 628 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 FAM47E-STBD1D6RA91 191 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 GNB5O14775 395 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 MAKP20794 623 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 ELK4P28324 431 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 TACR3P29371 465 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 CASP3P42574 277 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 HTR3AP46098 478 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 POLR2HP52434 150 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 SMSP52788 366 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 TEKQ02763 1124 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 CRYZQ08257 329 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 CTU2Q2VPK5 515 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 DCAF10Q5QP82 559 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 C6orf141Q5SZD1 244 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 C12orf73Q69YU5 71 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 CASP12Q6UXS9 341 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 GRINAQ7Z429 371 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 KIF18BQ86Y91 864 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 CCDC71Q8IV32 467 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 SIRT6Q8N6T7 355 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 FANK1Q8TC84 345 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 GPR119Q8TDV5 335 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 ST8SIA1Q92185 356 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 SGTBQ96EQ0 304 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 TEX12Q9BXU0 123 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 MRPS26Q9BYN8 205 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 ADAM19Q9H013 955 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 ADNPQ9H2P0 1102 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 ATP13A2Q9NQ11 1180 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms