RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 SUMO3P55854 103 aaPredicted RBP12.18□□□□□ -0.46
NFIX-201ENST00000358552 DEFA1P59665 94 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 DEFA3P59666 94 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 VBP1P61758 197 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 CBX3Q13185 183 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 CBFBQ13951 182 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 SNAPC1Q16533 368 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 KLHL22Q53GT1 634 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 C6orf15Q6UXA7 325 aaPredicted RBP12.18□□□□□ -0.46
NFIX-201ENST00000358552 ZNF620Q6ZNG0 422 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 SLC46A3Q7Z3Q1 461 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 PRR14Q9BWN1 585 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 CDCA4Q9BXL8 241 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 SLIRPQ9GZT3 109 aaKnown RBP12.18□□□□□ -0.46
NFIX-201ENST00000358552 ZNF700Q9H0M5 742 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 FN3KQ9H479 309 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 ICAM5Q9UMF0 924 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 FER1L5A0AVI2 2057 aa12.18□□□□□ -0.46
NFIX-201ENST00000358552 CDC40O60508 579 aaKnown RBP eCLIP12.17□□□□□ -0.46
NFIX-201ENST00000358552 SNX4O95219 450 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 FUT4P22083 530 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 MSX1P28360 303 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 TGFBR2P37173 567 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 SLC1A3P43003 542 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 EFNA3P52797 238 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 EFNB1P98172 346 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 INSM1Q01101 510 aaPredicted RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 C17orf67Q0P5P2 114 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 FOXD4Q12950 439 aaPredicted RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 SKP2Q13309 424 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 COL9A2Q14055 689 aaPredicted RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 FAAH2Q6GMR7 532 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 CADM2Q8N3J6 435 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 POGLUT1Q8NBL1 392 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 OR5W2Q8NH69 310 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 NDNFQ8TB73 568 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 TMEM163Q8TC26 289 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 TMEM234Q8WY98 164 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 ARSGQ96EG1 525 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 WDR77Q9BQA1 342 aaPredicted RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 TSSK6Q9BXA6 273 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 DEFB126Q9BYW3 111 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 NXF2Q9GZY0 626 aaKnown RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 TVP23BQ9NYZ1 205 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 CRNNQ9UBG3 495 aaPredicted RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 COL27A1Q8IZC6 1860 aaPredicted RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 CNOT1A5YKK6 2376 aaKnown RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 METTL15A6NJ78 407 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 ELOA3DA6NLF2 546 aaPredicted RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 LOC110117498-PIK3R3F6TDL0 507 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 GDF9O60383 454 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 STK17BO94768 372 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 SOX14O95416 240 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 MT-CO3P00414 261 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 SAGP10523 405 aaPredicted RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 EVI2BP34910 448 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 GRK5P34947 590 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 P2RX1P51575 399 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 MLLT10P55197 1068 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 PRPS1P60891 318 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 RPS3AP61247 264 aaKnown RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 SSPNQ14714 243 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 ELOA3BQ3SY89 546 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 ARMC4Q5T2S8 1044 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 PLAG1Q6DJT9 500 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 SMARCD3Q6STE5 483 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 FAM198BQ6UWH4 519 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 Q6ZPB1 254 aaPredicted RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 SHISA6Q6ZSJ9 500 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 CCDC103Q8IW40 242 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 ESX1Q8N693 406 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 ELOA3Q8NG57 546 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 ZNF563Q8TA94 476 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 ELP5Q8TE02 316 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 LIPHQ8WWY8 451 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 GGHQ92820 318 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 SECISBP2Q96T21 854 aaKnown RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 GPR87Q9BY21 358 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 MMP25Q9NPA2 562 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 MRPS18AQ9NVS2 196 aaKnown RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 FLRT3Q9NZU0 649 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 CNIH4Q9P003 139 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 MYOTQ9UBF9 498 aa12.17□□□□□ -0.46
NFIX-201ENST00000358552 PTRH2Q9Y3E5 179 aaKnown RBP12.17□□□□□ -0.46
NFIX-201ENST00000358552 GVINP1Q7Z2Y8 2422 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 TRBV11-1A0A0K0K1C0 115 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 PLD2O14939 933 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 PRODHO43272 600 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 TLX2O43763 284 aaPredicted RBP12.16□□□□□ -0.46
NFIX-201ENST00000358552 FADS1O60427 444 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 ICOSLGO75144 302 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 KLF7O75840 302 aaPredicted RBP12.16□□□□□ -0.46
NFIX-201ENST00000358552 PTTG1O95997 202 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 BMP4P12644 408 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 NR4A1P22736 598 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 NCS1P62166 190 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 PLAURQ03405 335 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 IRF3Q14653 427 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 STPG1Q5TH74 334 aa12.16□□□□□ -0.46
NFIX-201ENST00000358552 TMEM236Q5W0B7 351 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms