RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GAREM1Q9H706 876 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 NT5DC2Q9H857 520 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 KIF25Q9UIL4 384 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 MYOM1P52179 1685 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 TMX2-CTNND1H3BSU7 103 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 TRAPPC2P0DI81 140 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 TRAPPC2BP0DI82 140 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 IDUAP35475 653 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 OR1D4P47884 311 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 VEGFCP49767 419 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 TCTN1Q2MV58 587 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 OR8G2PQ6IF36 304 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 LRP10Q7Z4F1 713 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 C14orf80Q86SX3 495 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 CPXM2Q8N436 756 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 ENDOVQ8N8Q3 282 aaKnown RBP9.16□□□□□ -0.94
CHD3-202ENST00000358181 NDFIP1Q9BT67 221 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 SLC17A9Q9BYT1 436 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 PPIL3Q9H2H8 161 aaKnown RBP9.16□□□□□ -0.94
CHD3-202ENST00000358181 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.16□□□□□ -0.94
CHD3-202ENST00000358181 CDK1P06493 297 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 UBL4AP11441 157 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 ILKQ13418 452 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 KHDC1Q4VXA5 237 aaKnown RBP9.16□□□□□ -0.94
CHD3-202ENST00000358181 DCAF12L1Q5VU92 463 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 ARHGAP11AQ6P4F7 1023 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 ARSGQ96EG1 525 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 SARGQ9BW04 601 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 FOXQ1Q9C009 403 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 SIX2Q9NPC8 291 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 IL23AQ9NPF7 189 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 TMEM14AQ9Y6G1 99 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 TSPAN11A1L157 253 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 INMT-MINDY4F8WBC2 141 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 GLCEO94923 617 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 RAB7AP51149 207 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 RPS16P62249 146 aaKnown RBP9.15□□□□□ -0.94
CHD3-202ENST00000358181 DAG1Q14118 895 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 GALEQ14376 348 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 GK2Q14410 553 aaPredicted RBP9.15□□□□□ -0.94
CHD3-202ENST00000358181 CNIH3Q8TBE1 160 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 FER1L6-AS2Q96M78 137 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 DPH2Q9BQC3 489 aaPredicted RBP9.15□□□□□ -0.94
CHD3-202ENST00000358181 VN1R3Q9BXE9 311 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 POTEKPQ9BYX7 375 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 IKZF5Q9H5V7 419 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 FBXO7Q9Y3I1 522 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 TIMM9Q9Y5J7 89 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 PIGBOS1A0A0B4J2F0 54 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 FUOMA2VDF0 154 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 ANKRD66B4E2M5 251 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 ANHXE9PGG2 379 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 PHYHO14832 338 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 OR7C1O76099 320 aaPredicted RBP9.15□□□□□ -0.94
CHD3-202ENST00000358181 CLIC3O95833 236 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 SNAI1O95863 264 aaPredicted RBP9.15□□□□□ -0.94
CHD3-202ENST00000358181 ARSAP15289 507 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 ARSBP15848 533 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 THNSL2Q86YJ6 484 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 FBXL6Q8N531 539 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 FBXL20Q96IG2 436 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 FZD8Q9H461 694 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 MT-ND4P03905 459 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 AREGP15514 252 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 EVI2BP34910 448 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 PBX1P40424 430 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 RGRP47804 291 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 ZNF425Q6IV72 752 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 CATSPERDQ86XM0 798 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 SYNPRQ8TBG9 265 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 EMG1Q92979 244 aaKnown RBP9.15□□□□□ -0.94
CHD3-202ENST00000358181 BORCS6Q96GS4 357 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 CMSS1Q9BQ75 279 aaKnown RBP9.15□□□□□ -0.94
CHD3-202ENST00000358181 NICN1Q9BSH3 213 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 SCPEP1Q9HB40 452 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 HEBP1Q9NRV9 189 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 A0A1W2PS29 197 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 AGAP14A8MT82 685 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 GMPRP36959 345 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 PTGIRP43119 386 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 NKX2-5P52952 324 aaPredicted RBP9.15□□□□□ -0.94
CHD3-202ENST00000358181 SLC7A9P82251 487 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 MEP1BQ16820 701 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 MS4A13Q5J8X5 152 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 MFSD5Q6N075 450 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 SBSNQ6UWP8 590 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 GFRALQ6UXV0 394 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 CPEB2Q7Z5Q1 589 aaKnown RBP9.15□□□□□ -0.94
CHD3-202ENST00000358181 SUMF1Q8NBK3 374 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 OR5D18Q8NGL1 313 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 OR13C9Q8NGT0 318 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 OR2T4Q8NH00 348 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 CDKN2AIPNLQ96HQ2 116 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 KCNJ16Q9NPI9 418 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 WASH6PQ9NQA3 447 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 AK6Q9Y3D8 172 aaKnown RBP9.15□□□□□ -0.94
CHD3-202ENST00000358181 NFS1Q9Y697 457 aa9.15□□□□□ -0.94
CHD3-202ENST00000358181 MYH11P35749 1972 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 MSTNO14793 375 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 COCHO43405 550 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms