RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 C20orf141Q9NUB4 165 aa6.34□□□□□ -1.4
RTN4-203ENST00000357376 SLC23A1Q9UHI7 598 aa6.34□□□□□ -1.4
RTN4-203ENST00000357376 FBXL4Q9UKA2 621 aa6.34□□□□□ -1.4
RTN4-203ENST00000357376 CBLCQ9ULV8 474 aa6.34□□□□□ -1.4
RTN4-203ENST00000357376 PATJQ8NI35 1801 aa6.34□□□□□ -1.4
RTN4-203ENST00000357376 SCN3AQ9NY46 2000 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ALPK2Q86TB3 2170 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 A0A0A6YYC8 382 aaPredicted RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 TMEM229AB2RXF0 380 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 H7C1C5 153 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 I3L1I5 382 aaPredicted RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 RGS13O14921 159 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 PAPLNO95428 1278 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 UCHL1P09936 223 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 OR8G3PP0DMU2 310 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 MYOGP15173 224 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 LIMS1P48059 325 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 PXNP49023 591 aaPredicted RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 LCN6P62502 163 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 GALK2Q01415 458 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 DUSP2Q05923 314 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 GLYR1Q49A26 553 aaPredicted RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 ZNF628Q5EBL2 1059 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 FAAP20Q6NZ36 180 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ZNF550Q7Z398 422 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ANKRD33Q7Z3H0 272 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 UBE3DQ7Z6J8 389 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 PAQR7Q86WK9 346 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ZNF227Q86WZ6 799 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 TOR1AIP2Q8NFQ8 470 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 CCL4L1Q8NHW4 92 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 SYNPRQ8TBG9 265 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 DIO2Q92813 273 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 MMABQ96EY8 250 aaPredicted RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 DCLRE1CQ96SD1 692 aaKnown RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 TIMM29Q9BSF4 260 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 NOX4Q9NPH5 578 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ACTR10Q9NZ32 417 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 TBC1D29Q9UFV1 150 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 SERGEFQ9UGK8 458 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 FLVCR2Q9UPI3 526 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ADAM18Q9Y3Q7 739 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 PRAMEF27A3QJZ7 478 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 TRABD2BA6NFA1 517 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 C2orf74A8MZ97 194 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 KDM4EB2RXH2 506 aaPredicted RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 E9PI62 339 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 H0YGG7 62 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 DVL2O14641 736 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 PRKNO60260 465 aaPredicted RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 SEMA7AO75326 666 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 CD2P06729 351 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 MAKP20794 623 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 FGF9P31371 208 aaPredicted RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 AKT2P31751 481 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 OPRD1P41143 372 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 VASPP50552 380 aaPredicted RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 CTXN1P60606 82 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ARF3P61204 181 aaPredicted RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 SIRPAP78324 504 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ADAM8P78325 824 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 GALEQ14376 348 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 PCGF3Q3KNV8 242 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 COMTD1Q86VU5 262 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 TPRA1Q86W33 373 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 OR9A4Q8NGU2 314 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 SPPL3Q8TCT6 385 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ZDHHC1Q8WTX9 485 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 OR2M2Q96R28 347 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 LMF1Q96S06 567 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 SEC22CQ9BRL7 303 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 AUNIPQ9H7T9 357 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 CENPMQ9NSP4 180 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 MAN2C1Q9NTJ4 1040 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 FBXL3Q9UKT7 428 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 TBX21Q9UL17 535 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ANKRD36A6QL64 1941 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 SCDO00767 359 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 EIF1AYO14602 144 aaKnown RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 SELENOFO60613 162 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 UBL3O95164 117 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 F13BP05160 661 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 SPARCP09486 303 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 TFPIP10646 304 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 CXCR1P25024 350 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 EIF1AXP47813 144 aaKnown RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 PTH2RP49190 550 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 VEGFBP49765 207 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ART1P52961 327 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 SQSTM1Q13501 440 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ZNF511Q8NB15 262 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ZNF248Q8NDW4 579 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 PATE1Q8WXA2 126 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 KCTD12Q96CX2 325 aaKnown RBP6.33□□□□□ -1.4
RTN4-203ENST00000357376 C5orf34Q96MH7 638 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 PRDM7Q9NQW5 492 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 ACOXLQ9NUZ1 547 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 CLDND1Q9NY35 253 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 IL20Q9NYY1 176 aa6.33□□□□□ -1.4
RTN4-203ENST00000357376 CACNA1IQ9P0X4 2223 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms