RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 A0A1W2PPV4 95 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 I6L893 689 aaPredicted RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 MSTNO14793 375 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 STC2O76061 302 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 TYRP1P17643 537 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 IGFBP4P22692 258 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 CCR6P51684 374 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 RPS21P63220 83 aaKnown RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 SOX4Q06945 474 aaPredicted RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 DLX2Q07687 328 aaPredicted RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 UEVLDQ8IX04 471 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 SEC22AQ96IW7 307 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 EHFQ9NZC4 300 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 MON2Q7Z3U7 1717 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 XRN1Q8IZH2 1706 aaKnown RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 SYNGR4O95473 234 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 PIPP12273 146 aaPredicted RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 JUNDP17535 347 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 IMPA1P29218 277 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 SNRPGP62308 76 aaKnown RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR52I1Q8NGK6 324 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 FAM213BQ8TBF2 198 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC35A3Q9Y2D2 325 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 CPED1A4D0V7 1026 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 TMEM88BA6NKF7 163 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 RAD1O60671 282 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR2T7P0C7T2 308 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 OPRD1P41143 372 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 EMP2P54851 167 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 SEC61A1P61619 476 aaKnown RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR9A2Q8NGT5 310 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR2T27Q8NH04 317 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 DYNC2LI1Q8TCX1 351 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 RSC1A1Q92681 617 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 FAM71F1Q96KD3 344 aaPredicted RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 PURGQ9UJV8 347 aaKnown RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 ATXN7L1Q9ULK2 861 aaPredicted RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 FKTNO75072 461 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 STEAP1BQ6NZ63 245 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 FAM180BQ6P0A1 224 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 MEX3DQ86XN8 651 aaKnown RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 TEX19Q8NA77 164 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZBTB44Q8NCP5 570 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 ACVR1CQ8NER5 493 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR4K15Q8NH41 348 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 LMF2Q9BU23 707 aaKnown RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 ALOXE3Q9BYJ1 711 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 GMPR2Q9P2T1 348 aaKnown RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 TP53TG5Q9Y2B4 290 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 MRPS17Q9Y2R5 130 aaKnown RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 MDFIC2A0A1B0GVS7 189 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 TMEM212A6NML5 194 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 KLK3P07288 261 aaPredicted RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 HTR3AP46098 478 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 SNU13P55769 128 aaKnown RBP11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 SIRPAP78324 504 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 ACSM1Q08AH1 577 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 SGCZQ96LD1 299 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 CWH43Q9H720 699 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 NPFFR2Q9Y5X5 522 aa11.9□□□□□ -0.5
SYNCRIP-201ENST00000355238 HIDE1A8MVS5 230 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 TAGLN2P37802 199 aaKnown RBP11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 WNT7BP56706 349 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 DPPA2Q7Z7J5 298 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 GHSRQ92847 366 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 DNAJA3Q96EY1 480 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 AKIP1Q9NQ31 210 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZNF443Q9Y2A4 671 aaPredicted RBP11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 FTCDNL1E5RQL4 147 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 GYPBP06028 91 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 HTR1FP30939 366 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 GPR176Q14439 515 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 MPEG1Q2M385 716 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 DPY19L4Q7Z388 723 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR1M1Q8NGA1 313 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR10R2Q8NGX6 335 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 TMEM174Q8WUU8 243 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 DDOQ99489 341 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 ACSS1Q9NUB1 689 aaPredicted RBP11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 COL1A1P02452 1464 aaPredicted RBP11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 SCAF4O95104 1147 aaKnown RBP11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 ERVK-16P61578 105 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 HBA1P69905 142 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 GPR18Q14330 331 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 SLC5A12Q1EHB4 618 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZNF534Q76KX8 674 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 NEIL2Q969S2 332 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 PATZ1Q9HBE1 687 aaKnown RBP11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 GCM1Q9NP62 436 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 GZMKP49863 264 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 SELENOVP59797 346 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 SHC2P98077 582 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 TEKQ02763 1124 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 GAB1Q13480 694 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 RPE65Q16518 533 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZNF74Q16587 644 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 SIGIRRQ6IA17 410 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 PIANPQ8IYJ0 282 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 ST8SIA2Q92186 375 aa11.89□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR1F2PQ96R84 312 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms