RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ZNF559Q9BR84 538 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 POLE3Q9NRF9 147 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 C20orf141Q9NUB4 165 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 OR6C2Q9NZP2 312 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 APOBEC3BQ9UH17 382 aaKnown RBP10.55□□□□□ -0.72
CAPN9-202ENST00000354537 ING1Q9UK53 422 aaPredicted RBP10.55□□□□□ -0.72
CAPN9-202ENST00000354537 KCNMB2Q9Y691 235 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 DENND4AQ7Z401 1863 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 C1QTNF3-AMACRE9PGA6 284 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 AIPO00170 330 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 LAMP2P13473 410 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 NAT1P18440 290 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 NFYAP23511 347 aaPredicted RBP10.55□□□□□ -0.72
CAPN9-202ENST00000354537 CMPK1P30085 196 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 CRMP1Q14194 572 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 ZNF425Q6IV72 752 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 FAM199XQ6PEV8 388 aaPredicted RBP10.55□□□□□ -0.72
CAPN9-202ENST00000354537 Q6ZTK2 550 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 MTSS1LQ765P7 747 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 UBE2Q1Q7Z7E8 422 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 OR2L3Q8NG85 312 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 NT5CQ8TCD5 201 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 LGALS14Q8TCE9 139 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
CAPN9-202ENST00000354537 FCAMRQ8WWV6 532 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 NSMAFQ92636 917 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 KLHL15Q96M94 604 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 TM7SF3Q9NS93 570 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 SDHAF2Q9NX18 166 aa10.55□□□□□ -0.72
CAPN9-202ENST00000354537 TCF20Q9UGU0 1960 aaKnown RBP10.54□□□□□ -0.72
CAPN9-202ENST00000354537 A0A1W2PRG6 482 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 A0A1W2PS29 197 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 ANKRD20A5PA0PJZ0 165 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 MCRIP1C9JLW8 97 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 GALR3O60755 368 aaPredicted RBP10.54□□□□□ -0.72
CAPN9-202ENST00000354537 TSPAN9O75954 239 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 RGS11O94810 467 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 WDPCPO95876 746 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 RHOP08100 348 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 MRPL3P09001 348 aaKnown RBP10.54□□□□□ -0.72
CAPN9-202ENST00000354537 CALCBP10092 127 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 DRD5P21918 477 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 SLC16A1P53985 500 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 NTHL1P78549 312 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 LTB4RQ15722 352 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 ZNF626Q68DY1 528 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 FAM111BQ6SJ93 734 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 RPTNQ6XPR3 784 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 DNM1P46Q6ZS02 220 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 USP53Q70EK8 1073 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 EIF4E3Q8N5X7 224 aaKnown RBP10.54□□□□□ -0.72
CAPN9-202ENST00000354537 OR4K14Q8NGD5 310 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 OR13C2Q8NGS9 318 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 PELI1Q96FA3 418 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 HHIPL1Q96JK4 782 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 STACQ99469 402 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 DDOQ99489 341 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 TMEM27Q9HBJ8 222 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 NOX3Q9HBY0 568 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 C12orf4Q9NQ89 552 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 DUSP22Q9NRW4 184 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 PCDH10Q9P2E7 1040 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 MGAT4CQ9UBM8 478 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 C19orf53Q9UNZ5 99 aaPredicted RBP10.54□□□□□ -0.72
CAPN9-202ENST00000354537 RCE1Q9Y256 329 aa10.54□□□□□ -0.72
CAPN9-202ENST00000354537 A8MXK9 166 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 RFXAPO00287 272 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 CREBL2O60519 120 aaPredicted RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 GMDSO60547 372 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 GUSBP08236 651 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 SRMP19623 302 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 IL32P24001 234 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 DPP4P27487 766 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 NOS3P29474 1203 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 NUP62P37198 522 aaPredicted RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 TNFRSF17Q02223 184 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 LGALS3BPQ08380 585 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 DUSP5Q16690 384 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 PLPP4Q5VZY2 271 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 SFRP4Q6FHJ7 346 aaPredicted RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 LINGO2Q7L985 606 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 PRSS45Q7RTY3 260 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 ETFBKMTQ8IXQ9 262 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 MOSPD2Q8NHP6 518 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 SCARB1Q8WTV0 552 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 THEM6Q8WUY1 208 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 VWCEQ96DN2 955 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 S100A16Q96FQ6 103 aaKnown RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 CNN2Q99439 309 aaKnown RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 AUNIPQ9H7T9 357 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 PRSS16Q9NQE7 514 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 PPIEQ9UNP9 301 aaKnown RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 A0A087WV62 115 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 PRR19A6NJB7 356 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 IFITM5A6NNB3 132 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 NDUFB6O95139 128 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 PCCBP05166 539 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 CXCL2P19875 107 aa10.53□□□□□ -0.72
CAPN9-202ENST00000354537 MAPK3P27361 379 aaPredicted RBP10.53□□□□□ -0.72
CAPN9-202ENST00000354537 P2RY2P41231 377 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms