RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 ZNF175Q9Y473 711 aa12.85□□□□□ -0.35
LRP8-203ENST00000354412 A0A1W2PPK0 400 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 D6RAR5 112 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 LCMT2O60294 686 aaKnown RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 FCMRO60667 390 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 SDC3O75056 442 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 CD1AP06126 327 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 ATP5A1P25705 553 aaKnown RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 PTGER1P34995 402 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 GDI2P50395 445 aaKnown RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 ILF3Q12906 894 aaKnown RBP eCLIP12.84□□□□□ -0.352e-6■■■□□ 14.7
LRP8-203ENST00000354412 ZNF793Q6ZN11 406 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 LINC00518Q8N0U6 118 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 ZNF454Q8N9F8 522 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 CYB5D2Q8WUJ1 264 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 THEM6Q8WUY1 208 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 TMEM239Q8WW34 195 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 CNOT9Q92600 299 aaKnown RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 IRF7Q92985 503 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 TRMT61BQ9BVS5 477 aaKnown RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 ARL6Q9H0F7 186 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 CXXC1Q9P0U4 656 aaPredicted RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 IRAK3Q9Y616 596 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 A0A1W2PR48 441 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 A0A1W2PRU2 124 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 ANKRD20A5PA0PJZ0 165 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 ANXA2P2A6NMY6 339 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 K7ESM1 405 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 KPNA3O00505 521 aaPredicted RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 PRKRAO75569 313 aaKnown RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 HIST1H1TP22492 207 aaPredicted RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 MAPK3P27361 379 aaPredicted RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 PSMB5P28074 263 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 MC3RP41968 323 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 FXYD6P3P58550 94 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 SIRPAP78324 504 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 CSNK1G2P78368 415 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 GAS6Q14393 721 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 OR5M10Q6IEU7 315 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 SLC48A1Q6P1K1 146 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 GSG1LQ6UXU4 331 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 PARS2Q7L3T8 475 aaKnown RBP12.84□□□□□ -0.35
LRP8-203ENST00000354412 SYS1Q8N2H4 156 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 HDDC3Q8N4P3 179 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 OR13C5Q8NGS8 318 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 MYLIPQ8WY64 445 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 PNPLA2Q96AD5 504 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 SLC46A2Q9BY10 475 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 ZNF780BQ9Y6R6 833 aa12.84□□□□□ -0.35
LRP8-203ENST00000354412 LGALS8O00214 317 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 PPM1DO15297 605 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 ARPC5O15511 151 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 TGM5O43548 720 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 LDOC1O95751 146 aaPredicted RBP12.83□□□□□ -0.35
LRP8-203ENST00000354412 RAB40ALP0C0E4 278 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 C8orf89P0DMQ9 161 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 SDHBP21912 280 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 PDX1P52945 283 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 DPTQ07507 201 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 CDK5R1Q15078 307 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 SFRP5Q5T4F7 317 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 TMEM215Q68D42 235 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 RPL22L1Q6P5R6 122 aaKnown RBP12.83□□□□□ -0.35
LRP8-203ENST00000354412 LRFN4Q6PJG9 635 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 SYT9Q86SS6 491 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 PM20D2Q8IYS1 436 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 C7orf57Q8NEG2 295 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 RAB40AQ8WXH6 277 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 MRGPRX3Q96LB0 322 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 MS4A7Q9GZW8 240 aaPredicted RBP12.83□□□□□ -0.35
LRP8-203ENST00000354412 POLMQ9NP87 494 aaPredicted RBP12.83□□□□□ -0.35
LRP8-203ENST00000354412 ZNF223Q9UK11 482 aaPredicted RBP12.83□□□□□ -0.35
LRP8-203ENST00000354412 WDR45Q9Y484 360 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 ATG4BQ9Y4P1 393 aa12.83□□□□□ -0.35
LRP8-203ENST00000354412 TBC1D3KA0A087X1G2 549 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 TBC1D3BA6NDS4 549 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 TBC1D3FA6NER0 549 aaPredicted RBP12.83□□□□□ -0.36
LRP8-203ENST00000354412 NUPL2O15504 423 aaKnown RBP12.83□□□□□ -0.36
LRP8-203ENST00000354412 AQP8O94778 261 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 NDUFB6O95139 128 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 TIMP1P01033 207 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 SRMP19623 302 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 POU3F2P20265 443 aaPredicted RBP12.83□□□□□ -0.36
LRP8-203ENST00000354412 SLC2A5P22732 501 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 NOS3P29474 1203 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 AGERQ15109 404 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 ZNF750Q32MQ0 723 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 TMEM255AQ5JRV8 349 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 TBC1D3GQ6DHY5 549 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 HEPHL1Q6MZM0 1159 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 FRRS1Q6ZNA5 592 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 TMPRSS11FQ6ZWK6 438 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 UBE2Q1Q7Z7E8 422 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 ACOT4Q8N9L9 421 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 CLRN3Q8NCR9 226 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 OR5M9Q8NGP3 310 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 MRPL48Q96GC5 212 aaKnown RBP12.83□□□□□ -0.36
LRP8-203ENST00000354412 PRSS27Q9BQR3 290 aa12.83□□□□□ -0.36
LRP8-203ENST00000354412 ORAI3Q9BRQ5 295 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms