RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ZNF367Q7RTV3 350 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 P2RY8Q86VZ1 359 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 PLXDC1Q8IUK5 500 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 CMIPQ8IY22 773 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 RNF113BQ8IZP6 322 aaKnown RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 CLIP4Q8N3C7 705 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 SIMC1Q8NDZ2 872 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 OR52R1Q8NGF1 315 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 PIGXQ8TBF5 258 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 UBE2FQ969M7 185 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 ZG16BQ96DA0 208 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 VSTM2LQ96N03 204 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 TGM7Q96PF1 710 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 MCHR1Q99705 422 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 RHNO1Q9BSD3 238 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 ITPAQ9BY32 194 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 PRRG3Q9BZD7 231 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 FOLH1BQ9HBA9 442 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 SLC24A3Q9HC58 644 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 KRCC1Q9NPI7 259 aaPredicted RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 PRTFDC1Q9NRG1 225 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 SOHLH2Q9NX45 425 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 AASSQ9UDR5 926 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 TESQ9UGI8 421 aaKnown RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 WARS2Q9UGM6 360 aaKnown RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 MKLN1Q9UL63 735 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 GPR55Q9Y2T6 319 aaPredicted RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 CLDN16Q9Y5I7 305 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 NINQ8N4C6 2090 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 A0A1W2PPW3 197 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 TRAPPC13A5PLN9 417 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 LYPD3O95274 346 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 FADS2O95864 444 aaKnown RBP7.51□□□□□ -1.21
CD44-205ENST00000352818 F12P00748 615 aaPredicted RBP7.51□□□□□ -1.21
CD44-205ENST00000352818 CTSBP07858 339 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 TGFBR2P37173 567 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 HSD11B2P80365 405 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 EFNB1P98172 346 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 FUT7Q11130 342 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 SLC13A2Q13183 592 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 EXOSC7Q15024 291 aaKnown RBP7.51□□□□□ -1.21
CD44-205ENST00000352818 ZNF141Q15928 474 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 TMEM44Q2T9K0 475 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 MFSD4BQ5TF39 518 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 ZNF613Q6PF04 617 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 ZNF730Q6ZMV8 503 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 WDR53Q7Z5U6 358 aaPredicted RBP7.51□□□□□ -1.21
CD44-205ENST00000352818 D2HGDHQ8N465 521 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 STX19Q8N4C7 294 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 POGLUT1Q8NBL1 392 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 SLC38A9Q8NBW4 561 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 B3GNT7Q8NFL0 401 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 OR7G1Q8NGA0 311 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 TEX47Q8TBZ9 253 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 GPR151Q8TDV0 419 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 RIT1Q92963 219 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 DTNBP1Q96EV8 351 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 SLC41A3Q96GZ6 507 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 AHCYL2Q96HN2 611 aaKnown RBP7.51□□□□□ -1.21
CD44-205ENST00000352818 SLC41A2Q96JW4 573 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 DGAT2Q96PD7 388 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 TAAR6Q96RI8 345 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 WDR77Q9BQA1 342 aaPredicted RBP7.51□□□□□ -1.21
CD44-205ENST00000352818 LIN28AQ9H9Z2 209 aaKnown RBP7.51□□□□□ -1.21
CD44-205ENST00000352818 MED17Q9NVC6 651 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 MRPS18AQ9NVS2 196 aaKnown RBP7.51□□□□□ -1.21
CD44-205ENST00000352818 HCN3Q9P1Z3 774 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 PRODH2Q9UF12 536 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 ST6GALNAC2Q9UJ37 374 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 KCNE5Q9UJ90 142 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 SH3BGRL2Q9UJC5 107 aa7.51□□□□□ -1.21
CD44-205ENST00000352818 RPL36Q9Y3U8 105 aaKnown RBP7.51□□□□□ -1.21
CD44-205ENST00000352818 CENPVL1A0A0U1RR11 272 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 GXYLT2A0PJZ3 443 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 IRGMA1A4Y4 181 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 CPSF4LA6NMK7 179 aaKnown RBP7.5□□□□□ -1.21
CD44-205ENST00000352818 NPIPB9F8W1W9 429 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 H3BN98 237 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 TOX3O15405 576 aaPredicted RBP7.5□□□□□ -1.21
CD44-205ENST00000352818 BCAS1O75363 584 aaPredicted RBP7.5□□□□□ -1.21
CD44-205ENST00000352818 KCNK2O95069 426 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 SOX14O95416 240 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 BCL10O95999 233 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 THY1P04216 161 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 ADORA3P0DMS8 318 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 DRD5P21918 477 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 PSMB9P28065 219 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 POU1F1P28069 291 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 GABRA3P34903 492 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 RBM34P42696 430 aaKnown RBP7.5□□□□□ -1.21
CD44-205ENST00000352818 GIPRP48546 466 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 PCYT1AP49585 367 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 SEPHS1P49903 392 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 NUDT6P53370 316 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 RPS15P62841 145 aaKnown RBP7.5□□□□□ -1.21
CD44-205ENST00000352818 PSG6Q00889 435 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 RHAGQ02094 409 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 ST3GAL4Q11206 333 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 STX4Q12846 297 aa7.5□□□□□ -1.21
CD44-205ENST00000352818 AQP6Q13520 282 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms