RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 A0A1B0GWA3 101 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 SYNDIG1LA6NDD5 238 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ZNF593O00488 134 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ARL6IP5O75915 188 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 NGFRP08138 427 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 H2AFB2P0C5Z0 115 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ANKRD34CP0C6C1 535 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 MAT2AP31153 395 aaKnown RBP22.6■■□□□ 1.21
CPNE1-202ENST00000352393 RPS11P62280 158 aaKnown RBP eCLIP22.6■■□□□ 1.21
CPNE1-202ENST00000352393 MGAT2Q10469 447 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 KIR2DS3Q14952 304 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 EXOSC7Q15024 291 aaKnown RBP22.6■■□□□ 1.21
CPNE1-202ENST00000352393 TCEA2Q15560 299 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ST3GAL2Q16842 350 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 PRICKLE4Q2TBC4 344 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ESPNLQ6ZVH7 1005 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ZNF687Q8N1G0 1237 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ARL14Q8N4G2 192 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 SMIM4Q8WVI0 70 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 GIMAP1Q8WWP7 306 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 MARVELD3Q96A59 401 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 MS4A3Q96HJ5 214 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 TMEM168Q9H0V1 697 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 POLE3Q9NRF9 147 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 SPATA2Q9UM82 520 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 A0A1B0GVI7 797 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 A0A1W2PPK0 400 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ANKRD61A6NGH8 418 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 GPR171O14626 319 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 MT-ND4P03905 459 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 SYPP08247 313 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 UGT2B7P16662 529 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ZNF10P21506 573 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-202ENST00000352393 AK4P27144 223 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-202ENST00000352393 HCCSP53701 268 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ACTA2P62736 377 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ACTG2P63267 376 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 DYRK1AQ13627 763 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 GGTLC2Q14390 218 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ABHD13Q7L211 337 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 FGD2Q7Z6J4 655 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 FAM131CQ96AQ9 280 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ZMYND19Q96E35 227 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-202ENST00000352393 GSDMCQ9BYG8 508 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 EVA1AQ9H8M9 152 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 IL21RQ9HBE5 538 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 ZNF275Q9NSD4 429 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-202ENST00000352393 UCKL1Q9NWZ5 548 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 PILRAQ9UKJ1 303 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 MRPS7Q9Y2R9 242 aaKnown RBP22.6■■□□□ 1.21
CPNE1-202ENST00000352393 RWDD3Q9Y3V2 267 aa22.6■■□□□ 1.21
CPNE1-202ENST00000352393 WNT1P04628 370 aa22.59■■□□□ 1.21
CPNE1-202ENST00000352393 APODP05090 189 aa22.59■■□□□ 1.21
CPNE1-202ENST00000352393 GABRA3P34903 492 aa22.59■■□□□ 1.21
CPNE1-202ENST00000352393 RBM34P42696 430 aaKnown RBP22.59■■□□□ 1.21
CPNE1-202ENST00000352393 AP2S1P53680 142 aaPredicted RBP22.59■■□□□ 1.21
CPNE1-202ENST00000352393 COL28A1Q2UY09 1125 aa22.59■■□□□ 1.21
CPNE1-202ENST00000352393 SLC22A10Q63ZE4 541 aa22.59■■□□□ 1.21
CPNE1-202ENST00000352393 OVCH1Q7RTY7 1134 aa22.59■■□□□ 1.21
CPNE1-202ENST00000352393 TMEFF1Q8IYR6 380 aa22.59■■□□□ 1.21
CPNE1-202ENST00000352393 CHRNA9Q9UGM1 479 aa22.59■■□□□ 1.21
CPNE1-202ENST00000352393 PCDHGA9Q9Y5G4 932 aaKnown RBP22.59■■□□□ 1.21
CPNE1-202ENST00000352393 TRABD2BA6NFA1 517 aa22.58■■□□□ 1.21
CPNE1-202ENST00000352393 MAGEB4O15481 346 aaPredicted RBP22.58■■□□□ 1.21
CPNE1-202ENST00000352393 GATBO75879 557 aaKnown RBP22.58■■□□□ 1.21
CPNE1-202ENST00000352393 CD1AP06126 327 aa22.58■■□□□ 1.21
CPNE1-202ENST00000352393 CT62P0C5K7 136 aa22.58■■□□□ 1.21
CPNE1-202ENST00000352393 CDONQ4KMG0 1287 aa22.58■■□□□ 1.21
CPNE1-202ENST00000352393 PRSS41Q7RTY9 318 aa22.58■■□□□ 1.21
CPNE1-202ENST00000352393 POMGNT2Q8NAT1 580 aa22.58■■□□□ 1.21
CPNE1-202ENST00000352393 LGALS14Q8TCE9 139 aa22.58■■□□□ 1.21
CPNE1-202ENST00000352393 OR1E3Q8WZA6 343 aa22.58■■□□□ 1.21
CPNE1-202ENST00000352393 LRFN5Q96NI6 719 aa22.58■■□□□ 1.21
CPNE1-202ENST00000352393 CNN2Q99439 309 aaKnown RBP22.58■■□□□ 1.21
CPNE1-202ENST00000352393 SMAD5Q99717 465 aaKnown RBP22.58■■□□□ 1.21
CPNE1-202ENST00000352393 ORAI3Q9BRQ5 295 aa22.58■■□□□ 1.21
CPNE1-202ENST00000352393 EIF3KQ9UBQ5 218 aaKnown RBP22.58■■□□□ 1.21
CPNE1-202ENST00000352393 SHOXO15266 292 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 ADAM11O75078 769 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 IFI6P09912 130 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 OR2T7P0C7T2 308 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 GBX2P52951 348 aaPredicted RBP22.58■■□□□ 1.2
CPNE1-202ENST00000352393 TOR2AQ5JU69 321 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 CAMKVQ8NCB2 501 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 SDR9C7Q8NEX9 313 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 OR52E2Q8NGJ4 325 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 OR2T27Q8NH04 317 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 OR56B4Q8NH76 319 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 PTCHD1Q96NR3 888 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 ERMAPQ96PL5 475 aaPredicted RBP22.58■■□□□ 1.2
CPNE1-202ENST00000352393 SORCS2Q96PQ0 1159 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 AUNIPQ9H7T9 357 aa22.58■■□□□ 1.2
CPNE1-202ENST00000352393 GPR75O95800 540 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 ADPRHP54922 357 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 SIRPAP78324 504 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 CAMK2DQ13557 499 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 PRRT3Q5FWE3 981 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 UBE2NLQ5JXB2 153 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 UBE2Q1Q7Z7E8 422 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 SLITRK4Q8IW52 837 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms