RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 HAGHLQ6PII5 290 aaPredicted RBP13.72□□□□□ -0.21
NUP50-201ENST00000347635 OR5L2Q8NGL0 311 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 FTSJ1Q9UET6 329 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 TRBV5-3A0A0A0MS03 114 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 A0A0G2JMP0 313 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 BCAT2O15382 392 aaPredicted RBP13.72□□□□□ -0.21
NUP50-201ENST00000347635 FUT1P19526 365 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 C18orf63Q68DL7 685 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 EIF5AL1Q6IS14 154 aaKnown RBP13.72□□□□□ -0.21
NUP50-201ENST00000347635 RPL22L1Q6P5R6 122 aaKnown RBP13.72□□□□□ -0.21
NUP50-201ENST00000347635 OR4M2Q8NGB6 313 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 ZNF350Q9GZX5 532 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 PPA2Q9H2U2 334 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 MMP17Q9ULZ9 603 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 TRAV18A0A075B6X5 111 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 B8ZZF3 427 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 ELK1P19419 428 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 ZFP36L2P47974 494 aaKnown RBP13.72□□□□□ -0.21
NUP50-201ENST00000347635 SIAH3Q8IW03 269 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 TANKQ92844 425 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 GHSRQ92847 366 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 CHST8Q9H2A9 424 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 SRPK3Q9UPE1 567 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 SLC35A3Q9Y2D2 325 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 F5H0A9 414 aaPredicted RBP13.71□□□□□ -0.21
NUP50-201ENST00000347635 DSCR3O14972 297 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 CPMP14384 443 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 CLDN2P57739 230 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 SERTAD2Q14140 314 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 GPR176Q14439 515 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 ZNF750Q32MQ0 723 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 ZER1Q7Z7L7 766 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 JSRP1Q96MG2 331 aaPredicted RBP13.71□□□□□ -0.21
NUP50-201ENST00000347635 PTGES2Q9H7Z7 377 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 CDHR4A6H8M9 788 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 TNFRSF10CO14798 259 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 LDB3O75112 727 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 GDNFP39905 211 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 PDX1P52945 283 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 CTXN1P60606 82 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 FABP5Q01469 135 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 PRAMEF8Q5VWM4 474 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 PRAMEF7Q5VXH5 474 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 OR4K17Q8NGC6 315 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 STOML3Q8TAV4 291 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 HAVCR2Q8TDQ0 301 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 ELP4Q96EB1 424 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 OR8D2Q9GZM6 311 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 SIDT1Q9NXL6 827 aaKnown RBP13.71□□□□□ -0.21
NUP50-201ENST00000347635 POLR2AP24928 1970 aaKnown RBP13.71□□□□□ -0.21
NUP50-201ENST00000347635 CD22P20273 847 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 PKLRP30613 574 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 KIAA1024LP59773 190 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 S100A10P60903 97 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 CDNFQ49AH0 187 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 APOOLQ6UXV4 268 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 METTL27Q8N6F8 245 aaPredicted RBP13.71□□□□□ -0.21
NUP50-201ENST00000347635 PNLDC1Q8NA58 520 aaKnown RBP13.71□□□□□ -0.21
NUP50-201ENST00000347635 BCL2L14Q9BZR8 327 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 GLTPQ9NZD2 209 aa13.71□□□□□ -0.21
NUP50-201ENST00000347635 HCRTR2O43614 444 aa13.71□□□□□ -0.22
NUP50-201ENST00000347635 EIF1AXP47813 144 aaKnown RBP13.71□□□□□ -0.22
NUP50-201ENST00000347635 CSNK1G2P78368 415 aa13.71□□□□□ -0.22
NUP50-201ENST00000347635 GALEQ14376 348 aa13.71□□□□□ -0.22
NUP50-201ENST00000347635 LTB4RQ15722 352 aa13.71□□□□□ -0.22
NUP50-201ENST00000347635 GRK1Q15835 563 aa13.71□□□□□ -0.22
NUP50-201ENST00000347635 FAM189A2Q15884 450 aa13.71□□□□□ -0.22
NUP50-201ENST00000347635 EVA1AQ9H8M9 152 aa13.71□□□□□ -0.22
NUP50-201ENST00000347635 PLSCR3Q9NRY6 295 aa13.71□□□□□ -0.22
NUP50-201ENST00000347635 A0A087WUU8 490 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 SPDEFO95238 335 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 PBX2P40425 430 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 FXNQ16595 210 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 SLC48A1Q6P1K1 146 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 POGLUT1Q8NBL1 392 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 ZNF417Q8TAU3 575 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 TSNAXQ99598 290 aaKnown RBP13.7□□□□□ -0.22
NUP50-201ENST00000347635 SLC25A19Q9HC21 320 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 B3GNT2Q9NY97 397 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 EGFP01133 1207 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 CD34P28906 385 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 PRSS3P35030 304 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 CLDN20P56880 219 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 FOXK2Q01167 660 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 ULK3Q6PHR2 472 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 ZDHHC5Q9C0B5 715 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 CPNE7Q9UBL6 633 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 K7ESM1 405 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 SLC22A5O76082 557 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 AMY2AP04746 511 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 EXOSC7Q15024 291 aaKnown RBP13.7□□□□□ -0.22
NUP50-201ENST00000347635 CD276Q5ZPR3 534 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 C12orf73Q69YU5 71 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 OR13C3Q8NGS6 347 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 UBQLN3Q9H347 655 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 MEPEQ9NQ76 525 aaPredicted RBP13.7□□□□□ -0.22
NUP50-201ENST00000347635 KLRF1Q9NZS2 232 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 MCM3APO60318 1980 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.7□□□□□ -0.22
NUP50-201ENST00000347635 SOX1O00570 391 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms