RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SLC15A1P46059 708 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 SMSP52788 366 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 SNAPC1Q16533 368 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 UBE2UQ5VVX9 321 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 CTRB2Q6GPI1 263 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 RHBDD2Q6NTF9 364 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 LANCL3Q6ZV70 420 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 OR4Q3Q8NH05 313 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 LILRB4Q8NHJ6 448 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 RAB2BQ8WUD1 216 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 TMEM239Q8WW34 195 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 TRUB1Q8WWH5 349 aaKnown RBP8.47□□□□□ -1.05
ATG4A-202ENST00000345734 BORCS5Q969J3 196 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF559Q9BR84 538 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 MESP1Q9BRJ9 268 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 GTPBP2Q9BX10 602 aaKnown RBP8.47□□□□□ -1.05
ATG4A-202ENST00000345734 TSSK6Q9BXA6 273 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 POLDIP3Q9BY77 421 aaKnown RBP8.47□□□□□ -1.05
ATG4A-202ENST00000345734 DPH1Q9BZG8 443 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 POLR2J2Q9GZM3 115 aaKnown RBP8.47□□□□□ -1.05
ATG4A-202ENST00000345734 NXF5Q9H1B4 397 aaKnown RBP8.47□□□□□ -1.05
ATG4A-202ENST00000345734 TMEM27Q9HBJ8 222 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-202ENST00000345734 ENPP5Q9UJA9 477 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 GPR52Q9Y2T5 361 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 TRAV20A0A0B4J274 112 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 A0A0B4J2E0 115 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 LINC00854A0A1B0GVQ3 168 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 A0A1B0GX12 115 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 EFCAB10A6NFE3 127 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 SLC22A1O15245 554 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 YKT6O15498 198 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 CH25HO95992 272 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 PTHP01270 115 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 IFI30P13284 250 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF182P17025 639 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-202ENST00000345734 RORAP35398 523 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 B2MP61769 119 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 EFNB1P98172 346 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 ACY1Q03154 408 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 DOC2BQ14184 412 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 IRF3Q14653 427 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 ELAVL1Q15717 326 aaKnown RBP8.47□□□□□ -1.05
ATG4A-202ENST00000345734 TBCEQ15813 527 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-202ENST00000345734 CTF1Q16619 201 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.47□□□□□ -1.05
ATG4A-202ENST00000345734 PWWP2BQ6NUJ5 590 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 SLC30A6Q6NXT4 461 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 SLC27A4Q6P1M0 643 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF620Q6ZNG0 422 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 DCDC5Q6ZRR9 648 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 PRR22Q8IZ63 422 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 GATSQ8NAP1 163 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 CHPT1Q8WUD6 406 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 FGF11Q92914 225 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 ADIPOR1Q96A54 375 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 SAMD8Q96LT4 415 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 SLC46A1Q96NT5 459 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 GAL3ST4Q96RP7 486 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 GP6Q9HCN6 339 aa8.47□□□□□ -1.05
ATG4A-202ENST00000345734 MKKSQ9NPJ1 570 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-202ENST00000345734 TRBV23-1A0A0A0MS06 115 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 IGHV3-20A0A0C4DH32 117 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 SYNDIG1LA6NDD5 238 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 SERINC4A6NH21 518 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 H0YC42 278 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 FOXD2O60548 495 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-202ENST00000345734 RFPL3O75679 317 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 B3GALNT1O75752 331 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 CRYZL1O95825 349 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 ADORA3P0DMS8 318 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 IL32P24001 234 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 TGFBR2P37173 567 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 LIPAP38571 399 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 PPICP45877 212 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 LSM3P62310 102 aaKnown RBP8.46□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF91Q05481 1191 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 NFATC3Q12968 1075 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 CDONQ4KMG0 1287 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 SYT14P1Q58G82 188 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 PHF19Q5T6S3 580 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 PLAG1Q6DJT9 500 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF613Q6PF04 617 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 RABEPKQ7Z6M1 372 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 MRGPREQ86SM8 312 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 C9orf40Q8IXQ3 194 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 CADM2Q8N3J6 435 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 FAM26EQ8N5C1 309 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 BVESQ8NE79 360 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 CEP76Q8TAP6 659 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 STT3BQ8TCJ2 826 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 NAT6Q93015 286 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 KISS1RQ969F8 398 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-202ENST00000345734 LRR1Q96L50 414 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 Q96MT0 163 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF582Q96NG8 517 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-202ENST00000345734 B3GNT4Q9C0J1 378 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 GPN2Q9H9Y4 310 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-202ENST00000345734 APMAPQ9HDC9 416 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 MEPEQ9NQ76 525 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms