RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 RORAP35398 523 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 PSMD4P55036 377 aaKnown RBP11.81□□□□□ -0.52
CLK3-201ENST00000345005 TARDBPQ13148 414 aaKnown RBP eCLIP11.81□□□□□ -0.523e-6■■■□□ 14.6
CLK3-201ENST00000345005 TNK1Q13470 666 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 TRA2AQ13595 282 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLK3-201ENST00000345005 NSDHLQ15738 373 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 BAK1Q16611 211 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 CCDC58Q4VC31 144 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 CT45A2Q5DJT8 189 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 PHF19Q5T6S3 580 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 PGBD2Q6P3X8 592 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 MZT2AQ6P582 158 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 ZC3H14Q6PJT7 736 aaKnown RBP11.81□□□□□ -0.52
CLK3-201ENST00000345005 LAX1Q8IWV1 398 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 LSMEM1Q8N8F7 131 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 MORN4Q8NDC4 146 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 DUSP18Q8NEJ0 188 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 OR4K5Q8NGD3 323 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 TSLPQ969D9 159 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 ART5Q96L15 291 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 SLC46A1Q96NT5 459 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 NEDD4LQ96PU5 975 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 PRR14Q9BWN1 585 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 TSSK6Q9BXA6 273 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 ARRDC1-AS1Q9H2J1 176 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 SEMA4GQ9NTN9 838 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 TXNL4BQ9NX01 149 aaKnown RBP11.81□□□□□ -0.52
CLK3-201ENST00000345005 REV1Q9UBZ9 1251 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 KCNE5Q9UJ90 142 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 CBLCQ9ULV8 474 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 DTX4Q9Y2E6 619 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 OR10H1Q9Y4A9 318 aa11.81□□□□□ -0.52
CLK3-201ENST00000345005 DMDP11532 3685 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 NPIPA5A0A0B4J1W7 369 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 A0A1W2PQL4 384 aaPredicted RBP11.8□□□□□ -0.52
CLK3-201ENST00000345005 TMEM129A0AVI4 362 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 A8MUA0 341 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 NPIPA7E9PJI5 369 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 NTN3O00634 580 aaPredicted RBP11.8□□□□□ -0.52
CLK3-201ENST00000345005 FMO6PO60774 539 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 SCRG1O75711 98 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 CLPSP04118 112 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 NPIPA8P0DM63 369 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 DRD5P21918 477 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 FGF9P31371 208 aaPredicted RBP11.8□□□□□ -0.52
CLK3-201ENST00000345005 GRK6P43250 576 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 PPICP45877 212 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 RFX3P48380 749 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 SLC37A1P57057 533 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 RAB40BQ12829 278 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 TPBGQ13641 420 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 RIN1Q13671 783 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 PYDC2Q56P42 97 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 TRIQKQ629K1 86 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 C1orf94Q6P1W5 598 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 NPSR1Q6W5P4 371 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 CREB3L2Q70SY1 520 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 RRM2BQ7LG56 351 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 SLITRK4Q8IW52 837 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 CCDC28AQ8IWP9 274 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 OR4N2Q8NGD1 307 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 DAZLQ92904 295 aaKnown RBP11.8□□□□□ -0.52
CLK3-201ENST00000345005 TIGARQ9NQ88 270 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 CTPS2Q9NRF8 586 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.8□□□□□ -0.52
CLK3-201ENST00000345005 SIDT1Q9NXL6 827 aaKnown RBP11.8□□□□□ -0.52
CLK3-201ENST00000345005 MKL2Q9ULH7 1088 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 EXOSC1Q9Y3B2 195 aaKnown RBP11.8□□□□□ -0.52
CLK3-201ENST00000345005 KMT2EQ8IZD2 1858 aa11.8□□□□□ -0.52
CLK3-201ENST00000345005 IGLV3-12A0A075B6K2 115 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 CENPVL1A0A0U1RR11 272 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 H3BN98 237 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 LDOC1O95751 146 aaPredicted RBP11.79□□□□□ -0.52
CLK3-201ENST00000345005 C1QBP02746 253 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 CSF3P09919 207 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 GALP22466 123 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 ZNF136P52737 540 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 ATP12AP54707 1039 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 WNT4P56705 351 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 ZNF91Q05481 1191 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 FAPQ12884 760 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 ZNF141Q15928 474 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 DECR1Q16698 335 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 BICRALQ6AI39 1079 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 PWWP2BQ6NUJ5 590 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 COX15Q7KZN9 410 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 GDF7Q7Z4P5 450 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 ZAR1Q86SH2 424 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 PPP1R3BQ86XI6 285 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 OR14A16Q8NHC5 309 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 GNPDA2Q8TDQ7 276 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 SLC41A3Q96GZ6 507 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 AIFM2Q9BRQ8 373 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 OR8D2Q9GZM6 311 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 VN1R1Q9GZP7 353 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 SMOC1Q9H4F8 434 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 ABCB9Q9NP78 766 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 FGF20Q9NP95 211 aaPredicted RBP11.79□□□□□ -0.52
CLK3-201ENST00000345005 C14orf105Q9NVL8 296 aa11.79□□□□□ -0.52
CLK3-201ENST00000345005 RBFOX1Q9NWB1 397 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms