RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 TRIM64BA6NI03 449 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 KDM4EB2RXH2 506 aaPredicted RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 FOXD2O60548 495 aaPredicted RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 MRPS14O60783 128 aaKnown RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 CLUP10909 449 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 NOS3P29474 1203 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 SPCS2Q15005 226 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 CPOQ8IVL8 374 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 ZNF440Q8IYI8 595 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 CDK20Q8IZL9 346 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 LNX2Q8N448 690 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 OR52I1Q8NGK6 324 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 OR2Y1Q8NGV0 311 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 ZNF420Q8TAQ5 688 aaPredicted RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 PTP4A1Q93096 173 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 LGALS12Q96DT0 336 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 Q96MT0 163 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 SLC38A2Q96QD8 506 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 MYCBPQ99417 103 aaPredicted RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 TAPBPLQ9BX59 468 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 CDCA4Q9BXL8 241 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 ADAM19Q9H013 955 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 KRCC1Q9NPI7 259 aaPredicted RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 FAM86C1Q9NVL1 165 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 EML6Q6ZMW3 1958 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 MCIDASD6RGH6 385 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 ZNF182P17025 639 aaPredicted RBP12.36□□□□□ -0.43
CDC42-202ENST00000344548 BMP7P18075 431 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 FOXK2Q01167 660 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 PLBD1Q6P4A8 553 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 OR11G2Q8NGC1 345 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 OR10G3Q8NGC4 313 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 OTULINQ96BN8 352 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 IFT27Q9BW83 186 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 ENPP5Q9UJA9 477 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 OSGIN1Q9UJX0 560 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 TMEM5Q9Y2B1 443 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 ADAM18Q9Y3Q7 739 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 RPL36Q9Y3U8 105 aaKnown RBP12.36□□□□□ -0.43
CDC42-202ENST00000344548 ELOA3DA6NLF2 546 aaPredicted RBP12.36□□□□□ -0.43
CDC42-202ENST00000344548 ZNF701M0R085 212 aaPredicted RBP12.36□□□□□ -0.43
CDC42-202ENST00000344548 PRODHO43272 600 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 CDC40O60508 579 aaKnown RBP eCLIP12.36□□□□□ -0.43
CDC42-202ENST00000344548 ZFAND5O76080 213 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 DKK1O94907 266 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 NUDT14O95848 222 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 PIPP12273 146 aaPredicted RBP12.36□□□□□ -0.43
CDC42-202ENST00000344548 F8A1P23610 371 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 CD79BP40259 229 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 SLC1A3P43003 542 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 TMBIM6P55061 237 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 NRG3P56975 720 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 ELOA3BQ3SY89 546 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 SOWAHCQ53LP3 525 aaPredicted RBP12.36□□□□□ -0.43
CDC42-202ENST00000344548 CYB561A3Q8NBI2 242 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 ELOA3Q8NG57 546 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 OR4F15Q8NGB8 312 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 SGTBQ96EQ0 304 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 SEC14L4Q9UDX3 406 aa12.36□□□□□ -0.43
CDC42-202ENST00000344548 C19orf25Q9UFG5 118 aaPredicted RBP12.36□□□□□ -0.43
CDC42-202ENST00000344548 NXT1Q9UKK6 140 aaKnown RBP12.36□□□□□ -0.43
CDC42-202ENST00000344548 MED12Q93074 2177 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 C9J4A7 227 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 HCN1O60741 890 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 TCN2P20062 427 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 LCN1P31025 176 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 PTGDSP41222 190 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 ETV1P50549 477 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 TIGD6Q17RP2 521 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 COL28A1Q2UY09 1125 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 MEDAGQ5VYS4 303 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 ANKRD13BQ86YJ7 626 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 ERI1Q8IV48 349 aaKnown RBP12.35□□□□□ -0.43
CDC42-202ENST00000344548 OR8K3Q8NH51 312 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 OR5W2Q8NH69 310 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 MOSPD2Q8NHP6 518 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 OIT3Q8WWZ8 545 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 NACC2Q96BF6 587 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 RNFT2Q96EX2 444 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 TMEM80Q96HE8 168 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 RASL10BQ96S79 203 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 LSM2Q9Y333 95 aaKnown RBP12.35□□□□□ -0.43
CDC42-202ENST00000344548 CPAMD8Q8IZJ3 1885 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 RCBTB2O95199 551 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 DLGAP3O95886 979 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 MT-CO3P00414 261 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 JMJD7P0C870 316 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 HSMCR30P0CW71 290 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 CD36P16671 472 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 QPRTQ15274 297 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 MED22Q15528 200 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 GHDCQ8N2G8 530 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 OR52L1Q8NGH7 329 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 GPR119Q8TDV5 335 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 SMAP2Q8WU79 429 aaPredicted RBP12.35□□□□□ -0.43
CDC42-202ENST00000344548 CT55Q8WUE5 264 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 TAAR8Q969N4 342 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 DEFB126Q9BYW3 111 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 MED11Q9P086 117 aa12.35□□□□□ -0.43
CDC42-202ENST00000344548 PADI1Q9ULC6 663 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms