RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TMEM184BQ9Y519 407 aaPredicted RBP13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 SEC16AO15027 2179 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 A0A0G2JMP0 313 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 A0A0X1KG70 313 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 A0A1W2PPC4 97 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 IFNGP01579 166 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 MAP2K3P46734 347 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 GFERP55789 205 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 QPRTQ15274 297 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 TMEM53Q6P2H8 277 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 ARHGAP11AQ6P4F7 1023 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 OR4M2Q8NGB6 313 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 LMX1AQ8TE12 382 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 ST6GAL2Q96JF0 529 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 YIPF2Q9BWQ6 316 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 TRPV5Q9NQA5 729 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 CLEC4AQ9UMR7 237 aa13.69□□□□□ -0.22
VIPAS39-202ENST00000343765 CLDN4O14493 209 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 CTNSO60931 367 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 PAHP00439 452 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 CT45A8P0DMV1 189 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 CT45A9P0DMV2 189 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 MLLT3P42568 568 aaPredicted RBP13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 BLKP51451 505 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 CCR4P51679 360 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 FGFBP1Q14512 234 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 ZFP69Q49AA0 526 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 CT45A2Q5DJT8 189 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 ZNF57Q68EA5 555 aaPredicted RBP13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 ULK3Q6PHR2 472 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 VASH1Q7L8A9 365 aaPredicted RBP13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 BCORP1Q8N888 145 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 HOXB13Q92826 284 aaPredicted RBP13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 FRMD6Q96NE9 622 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 SLC38A3Q99624 504 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 CTRCQ99895 268 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 SOSTQ9BQB4 213 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 ZNF426Q9BUY5 554 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 RNF121Q9H920 327 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 ERVMER34-1Q9H9K5 563 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 RASD1Q9Y272 281 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 IDH3BO43837 385 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 GMFGO60234 142 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 PRAMEF2O60811 474 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 PROS1P07225 676 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 F8A1P23610 371 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 MTNR1BP49286 362 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 IFITM2Q01629 132 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 PLET1Q6UQ28 207 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 ZNF550Q7Z398 422 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 GRAMD2AQ8IUY3 354 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 RDH10Q8IZV5 341 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 SAMD12Q8N8I0 201 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 ABHD4Q8TB40 342 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 PMM1Q92871 262 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 TTYH2Q9BSA4 534 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 WACQ9BTA9 647 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 HDHD2Q9H0R4 259 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 OR10A5Q9H207 317 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 MKKSQ9NPJ1 570 aaPredicted RBP13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 NLKQ9UBE8 527 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 COL4A2P08572 1712 aa13.68□□□□□ -0.22
VIPAS39-202ENST00000343765 A8MUA0 341 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 TFP02787 698 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 HOXD12P35452 270 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 GPR3P46089 330 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 ATP12AP54707 1039 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 MRPS15P82914 257 aaKnown RBP13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 CD83Q01151 205 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 LYPD4Q6UWN0 246 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 SYT9Q86SS6 491 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 LSMEM1Q8N8F7 131 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 GHSRQ92847 366 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 SGTBQ96EQ0 304 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 ENAMQ9NRM1 1142 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 ADAM30Q9UKF2 790 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 CLDN16Q9Y5I7 305 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 ASXL3Q9C0F0 2248 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 NDUFB2O95178 105 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 EIF4EP06730 217 aaKnown RBP13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 RBM34P42696 430 aaKnown RBP13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 CAPZBP47756 277 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 KCNAB1Q14722 419 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 NKAIN2Q5VXU1 208 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 GPALPP1Q8IXQ4 340 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 ZNF595Q8IYB9 648 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 ZPLD1Q8TCW7 415 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 FYTTD1Q96QD9 318 aaKnown RBP13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 NMNAT3Q96T66 252 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 RANGRFQ9HD47 186 aaPredicted RBP13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 INPP5EQ9NRR6 644 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 BOLA1Q9Y3E2 137 aa13.67□□□□□ -0.22
VIPAS39-202ENST00000343765 SERINC4A6NH21 518 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 C4orf47A7E2U8 309 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 FAM171A2A8MVW0 826 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 SEC14L5O43304 696 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 PLPP2O43688 288 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 SDC3O75056 442 aa13.66□□□□□ -0.22
VIPAS39-202ENST00000343765 WNT1P04628 370 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms