RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 PLAC9Q5JTB6 97 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 NOXRED1Q6NXP6 359 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 TIFABQ6ZNK6 161 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 ACOT7LQ6ZUV0 252 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 KIAA0319LQ8IZA0 1049 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 OR4K15Q8NH41 348 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SLC22A18Q96BI1 424 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 CMBLQ96DG6 245 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 TVP23CQ96ET8 276 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SGCZQ96LD1 299 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 IL12RB2Q99665 862 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 PTDSS2Q9BVG9 487 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 ELOVL1Q9BW60 279 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SPACA1Q9HBV2 294 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 RAB18Q9NP72 206 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 STRAPQ9Y3F4 350 aaKnown RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 DIP2AQ14689 1571 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 NEMP2A6NFY4 417 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 RFPL4AA6NLU0 287 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 RFPL4AL1F8VTS6 287 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 AP4M1O00189 453 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 CCSO14618 274 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 TCF21O43680 179 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 IL33O95760 270 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 IGKV5-2P06315 115 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SDHBP21912 280 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 LRRC26Q2I0M4 334 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 C1QTNF12Q5T7M4 302 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 ADGRF3Q8IZF5 1079 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 OR13C4Q8NGS5 318 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 LCN9Q8WX39 176 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 PWWP2AQ96N64 755 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 TMEM59LQ9UK28 342 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 PPP1R3CQ9UQK1 317 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 TOPAZ1Q8N9V7 1692 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 A8MT66 165 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SUSD5O60279 629 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 FBP1P09467 338 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 CT45A10P0DMU9 189 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 PIN1Q13526 163 aaPredicted RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 NKX1-1Q15270 411 aaPredicted RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 AANATQ16613 207 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 POM121L1PQ3SYA9 428 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 RNLSQ5VYX0 342 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 OR52W1Q6IF63 320 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 WDR73Q6P4I2 378 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 RNF180Q86T96 592 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 DTX3Q8N9I9 347 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 TOMM40LQ969M1 308 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 CMSS1Q9BQ75 279 aaKnown RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 GINS3Q9BRX5 216 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 ST6GALNAC5Q9BVH7 336 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 MFSD1Q9H3U5 465 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 ACTL8Q9H568 366 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 GMPR2Q9P2T1 348 aaKnown RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 MEGF6O75095 1541 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 LNP1A1A4G5 178 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 HELTA6NFD8 242 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 B4GALT4O60513 344 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 CDC123O75794 336 aaPredicted RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 GPR12P47775 334 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 RPL29P47914 159 aaKnown RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 B2MP61769 119 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 OR5I1Q13606 314 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SPATC1Q76KD6 591 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 TMEM135Q86UB9 458 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 C2orf69Q8N8R5 385 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 OR51L1Q8NGJ5 315 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SLC35B2Q8TB61 432 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 GPR22Q99680 433 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 CHRDL1Q9BU40 450 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 ASAH2Q9NR71 780 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 PHPT1Q9NRX4 125 aaPredicted RBP5.81□□□□□ -1.48
VCAN-203ENST00000343200 MIOXQ9UGB7 285 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 BACE2Q9Y5Z0 518 aa5.81□□□□□ -1.48
VCAN-203ENST00000343200 SLC16A7O60669 478 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 MAFO75444 373 aaPredicted RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 MICAQ29983 383 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 APOBEC3HQ6NTF7 200 aaKnown RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 DGAT2L6Q6ZPD8 337 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 LYSMD2Q8IV50 215 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 GABRG1Q8N1C3 465 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 TMEM234Q8WY98 164 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 UROC1Q96N76 676 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 PRAP1Q96NZ9 151 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 TTPALQ9BTX7 342 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 Q9N2J8 555 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 SIRT3Q9NTG7 399 aaPredicted RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 ING1Q9UK53 422 aaPredicted RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 H7BY64 318 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 RGS13O14921 159 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 KLK1P06870 262 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 TGM1P22735 817 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 TACR3P29371 465 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 G6PCP35575 357 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 SLC35A2P78381 396 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 AKR1C1Q04828 323 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 SLC14A1Q13336 389 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 SLC39A11Q8N1S5 342 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 ZNF778Q96MU6 729 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms