RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CA14Q9ULX7 337 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 ESPL1Q14674 2120 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 PAPLNO95428 1278 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 ADH1BP00325 375 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 IL12BP29460 328 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 CCKBRP32239 447 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 MLLT3P42568 568 aaPredicted RBP7.63□□□□□ -1.19
HPS4-201ENST00000336873 ADPRHP54922 357 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 REEP5Q00765 189 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 FOXK2Q01167 660 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 RAB40BQ12829 278 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 FCN2Q15485 313 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 PLK5Q496M5 336 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 TMEM35AQ53FP2 167 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 HSD17B12Q53GQ0 312 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 EIPR1Q53HC9 387 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 MFSD12Q6NUT3 480 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 FCRLAQ7L513 359 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 OR4C15Q8NGM1 316 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 SLC37A2Q8TED4 501 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 Q96M85 177 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 OR2A14Q96R47 310 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 TAPBPLQ9BX59 468 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 TSPAN10Q9H1Z9 355 aaPredicted RBP7.63□□□□□ -1.19
HPS4-201ENST00000336873 PELI2Q9HAT8 420 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 ACSS1Q9NUB1 689 aaPredicted RBP7.63□□□□□ -1.19
HPS4-201ENST00000336873 TMEM74BQ9NUR3 256 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 PPIL1Q9Y3C6 166 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 CACNA1HO95180 2353 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 NLRC5Q86WI3 1866 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 IGKV1-8A0A0C4DH67 115 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 A0A1B0GWA3 101 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 POLR1CO15160 346 aaPredicted RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 RNF13O43567 381 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 SIX6O95475 246 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 TNFP01375 233 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 DBIP07108 87 aaKnown RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 ST6GAL1P15907 406 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 CXCR1P25024 350 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 RPS5P46782 204 aaKnown RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 TSPAN5P62079 268 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 PPP3R1P63098 170 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 DLX2Q07687 328 aaPredicted RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 BCL2A1Q16548 175 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 NKPD1Q17RQ9 610 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 BEX5Q5H9J7 111 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 BICRALQ6AI39 1079 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 DPY19L4Q7Z388 723 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 HDDC2Q7Z4H3 204 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 CASTOR1Q8WTX7 329 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 DERL3Q96Q80 235 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 NUDT22Q9BRQ3 303 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 GABARAPL1Q9H0R8 117 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 SFXN1Q9H9B4 322 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 PRDM7Q9NQW5 492 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 POT1Q9NUX5 634 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 TAS2R10Q9NYW0 307 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 LAMP5Q9UJQ1 280 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 RCE1Q9Y256 329 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 LIMS3P0CW19 117 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 LIMS4P0CW20 117 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 IL32P24001 234 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 ARRB1P49407 418 aaPredicted RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 GDI2P50395 445 aaKnown RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 NR0B1P51843 470 aaKnown RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 ARHGDIBP52566 201 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 DOC2BQ14184 412 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 RAB30Q15771 203 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 ARHGAP40Q5TG30 622 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 CARD17Q5XLA6 110 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 ALKBH2Q6NS38 261 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 C1orf94Q6P1W5 598 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 XKRXQ6PP77 449 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 C16orf47Q6ZP98 133 aaPredicted RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 Q6ZS52 159 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 C17orf47Q8NEP4 570 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 COQ8AQ8NI60 647 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 LRRC20Q8TCA0 184 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 THAP10Q9P2Z0 257 aaPredicted RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 PCDHGB1Q9Y5G3 927 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 AKAP6Q13023 2319 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 C17orf51A8MQB3 221 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 C2orf74A8MZ97 194 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 SEMA4FO95754 770 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 PLATP00750 562 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 IGHA2P01877 340 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 DNASE1P24855 282 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 PCBP3P57721 371 aaKnown RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 RPS15AP62244 130 aaKnown RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 ZP2Q05996 745 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 NSDHLQ15738 373 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 SIGIRRQ6IA17 410 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 OR5J2Q8NH18 312 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 PHOSPHO2Q8TCD6 241 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 NPRL2Q8WTW4 380 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 METTL21AQ8WXB1 218 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 DVL3Q92997 716 aaPredicted RBP7.62□□□□□ -1.19
HPS4-201ENST00000336873 SLC25A46Q96AG3 418 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 KLHDC7BQ96G42 594 aa7.62□□□□□ -1.19
HPS4-201ENST00000336873 TEAD3Q99594 435 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms