RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CPNE7Q9UBL6 633 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 PLSCR5A0PG75 271 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 METTL15A6NJ78 407 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 GLB1L2Q8IW92 636 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 SLC30A7Q8NEW0 376 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 USB1Q9BQ65 265 aaKnown RBP12.25□□□□□ -0.45
HLCS-201ENST00000336648 OR11A1Q9GZK7 315 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 METTL9Q9H1A3 318 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 HIPK2Q9H2X6 1198 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 ZNF443Q9Y2A4 671 aaPredicted RBP12.25□□□□□ -0.45
HLCS-201ENST00000336648 PUS1Q9Y606 427 aaKnown RBP eCLIP12.25□□□□□ -0.45
HLCS-201ENST00000336648 CSNK1G3Q9Y6M4 447 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 TRAPPC2LH3BP13 241 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 M6PRP20645 277 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 NPBWR1P48145 328 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 ZNF92Q03936 586 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 MGAT3Q09327 533 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 KCNJ8Q15842 424 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 HNRNPA1L2Q32P51 320 aaKnown RBP12.25□□□□□ -0.45
HLCS-201ENST00000336648 GGTA1PQ4G0N0 100 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 ZNF765Q7L2R6 523 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 OR6V1Q8N148 313 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 DTD2Q96FN9 168 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 ARNT2Q9HBZ2 717 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 CBLCQ9ULV8 474 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 ZNF281Q9Y2X9 895 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 GPR45Q9Y5Y3 372 aa12.25□□□□□ -0.45
HLCS-201ENST00000336648 ANKRD34BA5PLL1 514 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 ZNF780AO75290 641 aaPredicted RBP12.24□□□□□ -0.45
HLCS-201ENST00000336648 HLA-DOBP13765 273 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 ZNF140P52738 457 aaPredicted RBP12.24□□□□□ -0.45
HLCS-201ENST00000336648 MS4A2Q01362 244 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 SRYQ05066 204 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 MAP4K2Q12851 820 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 GTDC1Q4AE62 458 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 SDR9C7Q8NEX9 313 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 OR56B4Q8NH76 319 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 MEIOCA2RUB1 952 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 H0Y8G0 127 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 SNCGO76070 127 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 POU3F2P20265 443 aaPredicted RBP12.24□□□□□ -0.45
HLCS-201ENST00000336648 CPT2P23786 658 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 GAREM2Q75VX8 874 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 ZNF454Q8N9F8 522 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 FAM3CQ92520 227 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 NAT6Q93015 286 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 FAM122AQ96E09 287 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 DDX31Q9H8H2 851 aaKnown RBP12.24□□□□□ -0.45
HLCS-201ENST00000336648 COPS3Q9UNS2 423 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 A0A087WZY1 265 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 MEIS3P2A8K0S8 358 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 H7C1Q1 480 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 RFXAPO00287 272 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 GPR18Q14330 331 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 OR7A5Q15622 319 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 C18orf21Q32NC0 220 aaPredicted RBP12.24□□□□□ -0.45
HLCS-201ENST00000336648 FRMPD2BQ6IN97 320 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 TMEM25Q86YD3 366 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 CHST14Q8NCH0 376 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 OR56B1Q8NGI3 324 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 SENP5Q96HI0 755 aaPredicted RBP12.24□□□□□ -0.45
HLCS-201ENST00000336648 DHRS4Q9BTZ2 278 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 PRELID3BQ9Y3B1 194 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 GPR39O43194 453 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 ZFAND5O76080 213 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 ITGB2P05107 769 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 GMPRP36959 345 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 TAGLNQ01995 201 aaKnown RBP12.24□□□□□ -0.45
HLCS-201ENST00000336648 TLE4Q04727 773 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 CYB561A3Q8NBI2 242 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 OR5H6Q8NGV6 325 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 MAP3K3Q99759 626 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 ACAD8Q9UKU7 415 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 SHPRHQ149N8 1683 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 NPIPB15A6NHN6 443 aaPredicted RBP12.24□□□□□ -0.45
HLCS-201ENST00000336648 TXNDC12O95881 172 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 GRB2P62993 217 aaKnown RBP12.24□□□□□ -0.45
HLCS-201ENST00000336648 SLC14A1Q13336 389 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 HENMT1Q5T8I9 393 aaKnown RBP12.24□□□□□ -0.45
HLCS-201ENST00000336648 MCATQ8IVS2 390 aaKnown RBP12.24□□□□□ -0.45
HLCS-201ENST00000336648 PHYHIPQ92561 330 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 MIB2Q96AX9 1013 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 UBXN10Q96LJ8 280 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 NGBQ9NPG2 151 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 TREX1Q9NSU2 369 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 TAS2R16Q9NYV7 291 aa12.24□□□□□ -0.45
HLCS-201ENST00000336648 TSPAN31Q12999 210 aa12.23□□□□□ -0.45
HLCS-201ENST00000336648 FAM182AQ5T1J6 154 aa12.23□□□□□ -0.45
HLCS-201ENST00000336648 IER5LQ5T953 404 aa12.23□□□□□ -0.45
HLCS-201ENST00000336648 PLCXD3Q63HM9 321 aa12.23□□□□□ -0.45
HLCS-201ENST00000336648 CD300LGQ6UXG3 332 aa12.23□□□□□ -0.45
HLCS-201ENST00000336648 HTR3DQ70Z44 454 aa12.23□□□□□ -0.45
HLCS-201ENST00000336648 FAM217AQ8IXS0 508 aa12.23□□□□□ -0.45
HLCS-201ENST00000336648 ZNF891A8MT65 544 aaPredicted RBP12.23□□□□□ -0.45
HLCS-201ENST00000336648 ICAM2P13598 275 aa12.23□□□□□ -0.45
HLCS-201ENST00000336648 SFTPDP35247 375 aa12.23□□□□□ -0.45
HLCS-201ENST00000336648 ECI1P42126 302 aa12.23□□□□□ -0.45
HLCS-201ENST00000336648 MFGE8Q08431 387 aaPredicted RBP12.23□□□□□ -0.45
HLCS-201ENST00000336648 KLHDC8BQ8IXV7 354 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms