RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 KLHL13Q9P2N7 655 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 AKAP6Q13023 2319 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 TMED7-TICAM2A0A0A6YYA0 188 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 FAAHO00519 579 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 FBP2O00757 339 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 RAMP1O60894 148 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 FESP07332 822 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 THBS1P07996 1170 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 PABPC4LP0CB38 370 aaKnown RBP13.28□□□□□ -0.28
KATNA1-201ENST00000335643 GPX2P18283 190 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 TACR3P29371 465 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 SLC1A3P43003 542 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 MTPNP58546 118 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 GLIPR1L2Q4G1C9 344 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 RUNDC3AQ59EK9 446 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 GCNT6Q5T4J0 391 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.28□□□□□ -0.28
KATNA1-201ENST00000335643 DHDDSQ86SQ9 333 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 CDC20BQ86Y33 519 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 DACH2Q96NX9 599 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 RAD21L1Q9H4I0 556 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 GLRX2Q9NS18 164 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.28□□□□□ -0.28
KATNA1-201ENST00000335643 LEF1Q9UJU2 399 aaPredicted RBP13.28□□□□□ -0.28
KATNA1-201ENST00000335643 ITGB1BP2Q9UKP3 347 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 TRIM33Q9UPN9 1127 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 NDUFAF1Q9Y375 327 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 TMED7Q9Y3B3 224 aa13.28□□□□□ -0.28
KATNA1-201ENST00000335643 HIVEP1P15822 2718 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 SULT2B1O00204 365 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 CYTIPO60759 359 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 PRKD3O94806 890 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 IMPDH2P12268 514 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 GNA13Q14344 377 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 RNPS1Q15287 305 aaKnown RBP13.27□□□□□ -0.29
KATNA1-201ENST00000335643 ZNF311Q5JNZ3 666 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 TFAP2EQ6VUC0 442 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 STAC2Q6ZMT1 411 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 PTOV1Q86YD1 416 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 DPP10Q8N608 796 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 BBS10Q8TAM1 723 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 SLC25A43Q8WUT9 341 aaPredicted RBP13.27□□□□□ -0.29
KATNA1-201ENST00000335643 REXO5Q96IC2 774 aaKnown RBP13.27□□□□□ -0.29
KATNA1-201ENST00000335643 SPATA9Q9BWV2 254 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 ADAM19Q9H013 955 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 CCDC134Q9H6E4 229 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 ELOVL5Q9NYP7 299 aa13.27□□□□□ -0.29
KATNA1-201ENST00000335643 C6orf203Q9P0P8 240 aaPredicted RBP13.27□□□□□ -0.29
KATNA1-201ENST00000335643 ABCA4P78363 2273 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 C16orf97H3BN30 126 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 TPST1O60507 370 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 HRGP04196 525 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 YES1P07947 543 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 VIMP08670 466 aaKnown RBP13.26□□□□□ -0.29
KATNA1-201ENST00000335643 TFPIP10646 304 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 DNAJA1P31689 397 aaKnown RBP13.26□□□□□ -0.29
KATNA1-201ENST00000335643 PCYT1AP49585 367 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 POLR2HP52434 150 aaKnown RBP13.26□□□□□ -0.29
KATNA1-201ENST00000335643 CDK6Q00534 326 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 BNIP2Q12982 314 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 CAPRIN1Q14444 709 aaKnown RBP13.26□□□□□ -0.29
KATNA1-201ENST00000335643 LARS2Q15031 903 aaKnown RBP13.26□□□□□ -0.29
KATNA1-201ENST00000335643 TSC22D1Q15714 1073 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 PRAMEF8Q5VWM4 474 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 PRAMEF7Q5VXH5 474 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 METTL21CQ5VZV1 264 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 GTF2IRD2BQ6EKJ0 949 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 ABLIM2Q6H8Q1 611 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 GTF2IRD2Q86UP8 949 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 ANKRD27Q96NW4 1050 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 CGREF1Q99674 301 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 WFDC6Q9BQY6 131 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 SLC39A3Q9BRY0 314 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 KLHL4Q9C0H6 718 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 BCO1Q9HAY6 547 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 MED4Q9NPJ6 270 aa13.26□□□□□ -0.29
KATNA1-201ENST00000335643 TMEM247A6NEH6 219 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 ANGPT2O15123 496 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 GCM2O75603 506 aaPredicted RBP13.25□□□□□ -0.29
KATNA1-201ENST00000335643 PMS2P2O95744 297 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 THBDP07204 575 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 TROVE2P10155 538 aaKnown RBP eCLIP13.25□□□□□ -0.29
KATNA1-201ENST00000335643 PPIBP23284 216 aaKnown RBP13.25□□□□□ -0.29
KATNA1-201ENST00000335643 AQP1P29972 269 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 NTF4P34130 210 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 ARFIP2P53365 341 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 RASGEF1BQ0VAM2 473 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 SCARB2Q14108 478 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 HSP90B2PQ58FF3 399 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 TMEM201Q5SNT2 666 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 CCDC103Q8IW40 242 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 GABRG1Q8N1C3 465 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 SLC43A2Q8N370 569 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 CADM2Q8N3J6 435 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 ZC3HAV1LQ96H79 300 aaKnown RBP13.25□□□□□ -0.29
KATNA1-201ENST00000335643 ZNF317Q96PQ6 595 aaPredicted RBP13.25□□□□□ -0.29
KATNA1-201ENST00000335643 PRR14Q9BWN1 585 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 TMEM38AQ9H6F2 299 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 IFT52Q9Y366 437 aa13.25□□□□□ -0.29
KATNA1-201ENST00000335643 SPIN1Q9Y657 262 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms