RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IGSF8Q969P0 613 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SUCNR1Q9BXA5 334 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 TLR9Q9NR96 1032 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 FTSJ1Q9UET6 329 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 C10orf71Q711Q0 1435 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 ETV6P41212 452 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 HCCSP53701 268 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 HTRA3P83110 453 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SHC2P98077 582 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 C6orf132Q5T0Z8 1188 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 BPHLQ86WA6 291 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 GRAMD2AQ8IUY3 354 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 KLHDC8AQ8IYD2 350 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 CSNK1A1LQ8N752 337 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 OR9A2Q8NGT5 310 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 LMO3Q8TAP4 145 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 KATNB1Q9BVA0 655 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF281Q9Y2X9 895 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 KPTNQ9Y664 436 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 GPLD1P80108 840 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SLC5A12Q1EHB4 618 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 KIAA1143Q96AT1 154 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 C12orf42Q96LP6 360 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 RBM24Q9BX46 236 aaKnown RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SPHK1Q9NYA1 384 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 B4DXG7 233 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 CSO75390 466 aaKnown RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 C1QBP02746 253 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 ARRB1P49407 418 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SRP9P49458 86 aaKnown RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 EFNA3P52797 238 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 ACSM1Q08AH1 577 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 NHSL2Q5HYW2 709 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 MANEALQ5VSG8 457 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 RTL6Q6ICC9 239 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 CBLL1Q75N03 491 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SLC35F3Q8IY50 421 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 C15orf54Q8N8G6 183 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 GPR26Q8NDV2 337 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SLC7A6Q92536 515 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 DVL3Q92997 716 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 FYTTD1Q96QD9 318 aaKnown RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 BOCQ9BWV1 1114 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 OR52D1Q9H346 318 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 INIPQ9NRY2 104 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 IGKV6D-41A0A0C4DH26 115 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 ZCWPW2A0A1B0GU75 182 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 C2orf72A6NCS6 295 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 DUSP11O75319 330 aaKnown RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 NXPH3O95157 252 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 HLA-HP01893 362 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 BCKDHBP21953 392 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SHC1P29353 583 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 PRDX3P30048 256 aaKnown RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 EMP3P54852 163 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM244Q5VVB8 128 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 CD276Q5ZPR3 534 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SFXN4Q6P4A7 337 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 LARP4Q71RC2 724 aaKnown RBP eCLIP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SLC46A3Q7Z3Q1 461 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 MS4A4EQ96PG1 132 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 PARP12Q9H0J9 701 aaKnown RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 OLAHQ9NV23 265 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 PSORS1C1Q9UIG5 152 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 NSA2O95478 260 aaKnown RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 THBS1P07996 1170 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 RNH1P13489 461 aaKnown RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 PCSK6P29122 969 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 MC3RP41968 323 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 LRRC26Q2I0M4 334 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 FRMPD2BQ6IN97 320 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 NDUFAF7Q7L592 441 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 KCNRGQ8N5I3 272 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 OR5M8Q8NGP6 311 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 DAZLQ92904 295 aaKnown RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 C3orf30Q96M34 536 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 PDCD1LG2Q9BQ51 273 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 GPR45Q9Y5Y3 372 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 LRIT2A6NDA9 550 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 SLC9B1P1A6NJY1 282 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ZFP92A6NM28 416 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 D6RAR5 112 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 EIF3FO00303 357 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 GPR32O75388 356 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 KCNK5O95279 499 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 S100A8P05109 93 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 TRHRP34981 398 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 CNN3Q15417 329 aaKnown RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF239Q16600 458 aaKnown RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF805Q5CZA5 627 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 SMIM15Q7Z3B0 74 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM102Q8N9M5 508 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 OR13C9Q8NGT0 318 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 PEX11GQ96HA9 241 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 SLCO5A1Q9H2Y9 848 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 POFUT1Q9H488 388 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF629Q9UEG4 869 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 LEFTY2O00292 366 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 CLEC2LP0C7M8 214 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms