RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PIGQQ9BRB3 760 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 SLC6A20Q9NP91 592 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 TPRP12270 2363 aaKnown RBP13.93□□□□□ -0.18
C9orf47-201ENST00000334490 OR14I1A6ND48 311 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 SEC16AO15027 2179 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 LRRTM2O43300 516 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 HTR3BO95264 441 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 NME1P15531 152 aaKnown RBP13.93□□□□□ -0.18
C9orf47-201ENST00000334490 AMY2BP19961 511 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 PVALBP20472 110 aaPredicted RBP13.93□□□□□ -0.18
C9orf47-201ENST00000334490 COL9A1P20849 921 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 EIF1P41567 113 aaKnown RBP13.93□□□□□ -0.18
C9orf47-201ENST00000334490 SIRPAP78324 504 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 SLC35A1P78382 337 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 OR5W2Q8NH69 310 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 A4GALTQ9NPC4 353 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 PPT2Q9UMR5 302 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 WIF1Q9Y5W5 379 aa13.93□□□□□ -0.18
C9orf47-201ENST00000334490 TRIP12Q14669 1992 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-201ENST00000334490 CASP8AP2Q9UKL3 1982 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 ZNF850A8MQ14 1090 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 RBMXP38159 391 aaKnown RBP13.92□□□□□ -0.18
C9orf47-201ENST00000334490 ART1P52961 327 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 S100A10P60903 97 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 ZNF45Q02386 682 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 RAB40BQ12829 278 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 TBPL2Q6SJ96 375 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 C1orf210Q8IVY1 113 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 OR6T1Q8NGN1 323 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 OR10A2Q9H208 303 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 GSKIPQ9P0R6 139 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 PCDHGA8Q9Y5G5 932 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 NCS1P62166 190 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 BTG2P78543 158 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 CAMK2DQ13557 499 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 MLC1Q15049 377 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 ZNF566Q969W8 418 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 MVB12AQ96EY5 273 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 DUSP22Q9NRW4 184 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 VSX1Q9NZR4 365 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-201ENST00000334490 ABCD2Q9UBJ2 740 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 C19orf53Q9UNZ5 99 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-201ENST00000334490 PRKYO43930 277 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 HOXB9P17482 250 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-201ENST00000334490 SLC2A5P22732 501 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 CARD18P57730 90 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 PCBD1P61457 104 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 SPEM2Q0P670 501 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 CDNFQ49AH0 187 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 ZNF517Q6ZMY9 492 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-201ENST00000334490 SLC16A14Q7RTX9 510 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 CCDC36Q8IYA8 594 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 HAVCR2Q8TDQ0 301 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 TSLPQ969D9 159 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 ACTR6Q9GZN1 396 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 MGAT4AQ9UM21 535 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 KCNIP3Q9Y2W7 256 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 EMC9Q9Y3B6 208 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 ZDBF2Q9HCK1 2354 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 PLSCR5A0PG75 271 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 H0YIG0 161 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 GNRHRP30968 328 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 HES5Q5TA89 166 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 OR7E24Q6IFN5 339 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 NIPAL3Q6P499 406 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 MEPCEQ7L2J0 689 aaKnown RBP13.92□□□□□ -0.18
C9orf47-201ENST00000334490 KMT5CQ86Y97 462 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 ZNF683Q8IZ20 524 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 TP53I13Q8NBR0 393 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-201ENST00000334490 ABHD11Q8NFV4 315 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 TMEM163Q8TC26 289 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 SLC25A44Q96H78 314 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-201ENST00000334490 SLC6A7Q99884 636 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 TMEM38AQ9H6F2 299 aa13.92□□□□□ -0.18
C9orf47-201ENST00000334490 SHANK3Q9BYB0 1731 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 TRAV6A0A075B6T7 132 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 LILRA5A6NI73 299 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 GASTP01350 101 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 ANXA3P12429 323 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 GPR3P46089 330 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 BEND4Q6ZU67 534 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 BPHLQ86WA6 291 aaPredicted RBP13.91□□□□□ -0.18
C9orf47-201ENST00000334490 PRR14Q9BWN1 585 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 POTEKPQ9BYX7 375 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 SIDT1Q9NXL6 827 aaKnown RBP13.91□□□□□ -0.18
C9orf47-201ENST00000334490 POMT2Q9UKY4 750 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 NOSIPQ9Y314 301 aaKnown RBP13.91□□□□□ -0.18
C9orf47-201ENST00000334490 TRAV36DV7A0A075B6V5 113 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 H3BUI4 141 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 CHMP24386 653 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 GPR85P60893 370 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 CCL7P80098 99 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 GAB1Q13480 694 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 Q8N402 240 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 CNOT9Q92600 299 aaKnown RBP13.91□□□□□ -0.18
C9orf47-201ENST00000334490 TFAP2CQ92754 450 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 C1QTNF3Q9BXJ4 246 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 NXF5Q9H1B4 397 aaKnown RBP13.91□□□□□ -0.18
C9orf47-201ENST00000334490 OR10A4Q9H209 315 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 CALHM2Q9HA72 323 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms